Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01420 ATGAGGGACAACAAAGCTCTATGGGAATTGTTGTCAAATATTTCAAATTGGGAGACTCGCCAAATGGTATCTTGCAAACCTTTTAGACCTTGTTTCTTGGATGTGGTAATATTGCAACAAGCACCGCAATATTACAGTGAGGAGGAAATGGCTCAAGTCAAGAATATCAGCAAATTGCTTCTACAAGAAGAAAATGATGAGCAGAAAAATAATATTAAAAGTTTGATGAAAAAAAGGCATATTCAAATTGAAGACTTGCTTGAGGAGGAGGAAAGAGTCACACCAGTTAAAAAAAGATCAAGAAAAGTTACTATTAAGGTAAAAACAATACCACCCTCATCACCACAGCAACTACCATCATCACCATTACCACCACCGCCATTACTAATACTACCACCATCGCTACCCCCACCGTTGTCATCACCACCGCCACTACCACCACCACCACTACCACCGTCATTACTCCCACCATTATCACCACCATTGCCAGCACAACCATTGTTACCTGCACCTCCACCAGATTTGCCTACAACATTCAGAAGTTGGATTGAAGAGTTGAACGGTTCTGATGTAAATTTTCTCATGGACAAGAAACTTCACAACAGTGACGTGAGCACAAATAACAATCGTTTATCCATGCCACAAAATCAACTTAAGTCTGATTTCCTCACCGAAGCTGAGAAAGCAATGTTGGATGAAAAAGAAGGCATTGAAGTGATTGTCTTAGACCCACATCTTAGACAATTTTCTTTAATCTTGAAGAGGTGGAAGATGAAAAATGTGAACATCTACAATCTAATAAGGAATTGGAACAAAGTTGTGCATGAAAATAAATTTGAGAAAAACCATGAACTCCAAATATGGTCTTGTAGGGTCAATAGCAAATTGTACTTTCTGTTATATAAACATTAA 912 0.3827 MRDNKALWELLSNISNWETRQMVSCKPFRPCFLDVVILQQAPQYYSEEEMAQVKNISKLLLQEENDEQKNNIKSLMKKRHIQIEDLLEEEERVTPVKKRSRKVTIKVKTIPPSSPQQLPSSPLPPPPLLILPPSLPPPLSSPPPLPPPPLPPSLLPPLSPPLPAQPLLPAPPPDLPTTFRSWIEELNGSDVNFLMDKKLHNSDVSTNNNRLSMPQNQLKSDFLTEAEKAMLDEKEGIEVIVLDPHLRQFSLILKRWKMKNVNIYNLIRNWNKVVHENKFEKNHELQIWSCRVNSKLYFLLYKH. 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01420 303 MobiDBLite consensus disorder prediction 95 173 - -
Seca12g01420 303 SUPERFAMILY DNA-binding pseudobarrel domain 192 299 IPR015300 -
Seca12g01420 303 CDD B3_DNA 197 302 IPR003340 GO:0003677
Seca12g01420 303 Pfam B3 domain-containing protein At2g31720-like 182 275 IPR005508 GO:0003677
Seca12g01420 303 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 166 302 IPR005508 GO:0003677
Seca12g01420 303 MobiDBLite consensus disorder prediction 115 173 - -
Seca12g01420 303 Gene3D - 184 302 IPR015300 -
Seca12g01420 303 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01420 Seca-Chr12 14244188 14245231 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01420 180 300 B3 DNA Binding Superfamily AT1G05930 31.783 1.44e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01420 - - gmx:102663171 157.532