Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01417 ATGTTCAAGTTTTTGGTTAGCAGAGCAACGAAGGTTTCAATCCCAAGGAATCACAATGCCATTACTTCTTCCAATTTGGTTCGGTGTGTTCATTCATTACAATTTGCCACTGTAGAAGCAGAACAGATATCAGGTTCTAGGCCTGCTGAAGTTTTGAACTTGGTGCAGGGTAAATGGGTAGGATCTTTGAACTGGAATACAGTTGTGGATCCGTTAAATGGAGACTCATTTATTAAAGTTGCTGAAGTTGATGAAACAGACATTCAGCCCTTTGTGCAAAGCTTGTCCAGCTGTCCCAAACATGGTTTACACAATCCTTTCAAGGCACCAGAGAGATATCTTATGTTGGGAGATGTATCTACTAAGGCGGCTCACATGTTATCACTTCCTAAGGTTTCAGATTTCTTTACAAGGCTAATACAAAGGGTTTCACCAAAGAGTTACCAACAGGCTGAAGGAGAAGTTTATGTGACACGAAAGTTTCTAGAGAATTTTTGTGGAGATCAGGTTCGATTCCTGGCAAGGTCCTTTGCAGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGCTTTCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCTTAGAGATTCCAGTCCTTCAGTTGATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTTGATAGCAAGGTGAGCATTGTTATGGAGCAAATGTTGCGGCTTCTTCATACATGTGGTTTACCAGTAGAAGATGTAGACTTCATAAATTCTGATGGGAAGACAATGAACAAGCTGTTGTTGGAGGGAAATCCACGAATGACCCTTTTTACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGGTGATTTGAGGGGCCGCATTAAGTTGGAAGATGCTGGATTTGACTGGAAAATACTTGGCCCTGATGTTCATCAGGTTTATGAGGATTACATTGCTTGGGTCTGTGACCAGGATGCATATGCTTGCAGTGGTCAGAAGTGCTCAGCACAATCATTGTTATTTATGCATGAGGTCAGTCACATTGGTCATTTTGAGAACAACTGGTCGAATACTTCCTTCATATCTAAATTGAAAGATCTTGCTGAGAGAAGAAAGCTAGCGGACTTGACAATTGGTCCAGTTCTCACTTTTACAACTGATTCGTTGCTAGAACACACGAATAAGTTACTTGAGATACCTGGGGCAAAACTGCTCTTTGGAGGTCGGCCTCTGGAGGACCATTCAATTCCACCGATTTATGGTGCTATTAAACCGACTGCTGTTTATGTTCCTCTTGAGGAAATTATGAAGGAAAAGAATTATGAGCTTGTGACAAAAGAAATATTCGGACCTTTTCAGGTTATTACTGACTATAAAAGCAGTCAACTATCAACTGTGTTGGATGCTGTGGAAAAAATGCATGCACATTTAACTGCTGCTGTAGTTTCAAACGATCCTTTATTCTTACAGGAAGTCATTGGCAAATCAGTAAATGGAACTACTTATGCTGGTTTAAGAGCAAGGACAACAGGAGCTCCCCAGAATCACTGGTTTGGACCTGCTGGTGACCCTAGGGGTGCAGGAATTGGAACACCAGAAGCTATAAGACTTGTATGGTCATGTCATAGAGAAATTATATATGATATTGGGCCCGTGCCACAACATTGGGAAATTCCTCCATCAACCTGA 1695 0.4177 MFKFLVSRATKVSIPRNHNAITSSNLVRCVHSLQFATVEAEQISGSRPAEVLNLVQGKWVGSLNWNTVVDPLNGDSFIKVAEVDETDIQPFVQSLSSCPKHGLHNPFKAPERYLMLGDVSTKAAHMLSLPKVSDFFTRLIQRVSPKSYQQAEGEVYVTRKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHTCGLPVEDVDFINSDGKTMNKLLLEGNPRMTLFTGSSRVAEKLAGDLRGRIKLEDAGFDWKILGPDVHQVYEDYIAWVCDQDAYACSGQKCSAQSLLFMHEVSHIGHFENNWSNTSFISKLKDLAERRKLADLTIGPVLTFTTDSLLEHTNKLLEIPGAKLLFGGRPLEDHSIPPIYGAIKPTAVYVPLEEIMKEKNYELVTKEIFGPFQVITDYKSSQLSTVLDAVEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIRLVWSCHREIIYDIGPVPQHWEIPPST. 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01417 564 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 29 564 IPR044638 GO:0004029
Seca12g01417 564 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 329 340 IPR016160 GO:0016491
Seca12g01417 564 FunFam Aldehyde dehydrogenase 12 310 509 - -
Seca12g01417 564 Pfam Aldehyde dehydrogenase family 67 505 IPR015590 GO:0016491
Seca12g01417 564 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 505 IPR016163 GO:0016620
Seca12g01417 564 SUPERFAMILY ALDH-like 53 532 IPR016161 GO:0016491
Seca12g01417 564 FunFam probable aldehyde dehydrogenase 44 302 - -
Seca12g01417 564 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 302 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01417 Seca-Chr12 14213567 14221653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01417 1 564 Aldehyde Dehydrogenase Gene Family AT5G62530 76.543 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01417 K00294 - gmx:100806579 1011.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01417 12 14213567 14221653 Seca12g01417 12 14213567 14221653 ECH