Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01408 ATGGTGCAGAAGCGTCCTTTTGATGCTGAGGAAATCCCTGAGGTGTCCTTCAAACACCCAAAACAAGTGGGACCTAGTAATCAGTTTATGTCATTTGCAGAATCTGTTTTTCCTGAGGATGGTTGCCACATACCTAAAACACCAGTTGAATATCATAAAGGAGCTATGGAATTTGAAACTAGCTTTCCTGGAGGCATTTCTGGTTCTTCTTGGGCCACCAGTGACACTAGTGAAGATTTCCAATTAGAACCACCTCTACATCTCCCTTTTCTACCCGAGTATTTTAGTCCAGAGCGTCCAACAAGGACATTAGTTCACTATGAGGACATCTATTCCATCCTCCTTAAACATCCACCACCTAAACTTGTATCTGTTGGACCCAATCATCAAGCTGATGTTCCAGTGTGGGATTCCAGTGCCACTAGTAGATCAAATGTTGATGAAAAACTGATGGGAACCTGTATAATCCCTATGCCTCAGATGGAACTATCTATCTATGATAATGAGGTAGTTGGAAAGGGCAGAACTGATTGTAGCTGTGAAGACAGGGGATCCATGAGATGTGTCCGACAGCATATAGTGGAAGCAAGAGAGGAACTTATGAAAACCATTGGGAATGAGATGTTTGCCAACTTGGGGCTCTTTGAAATGGGAGAACAAGTGGCAGATAAATGGAGTGAAGAGGAAGAACAACTATTTCGCGAGGTTGTCTTCAATAGTCCAGGAACCCTGGGCAAGACTTTCTGGGACTATCTCTCCATTGCTTTCCCTTTGAAAACCAAAAAGGAGATAGTTAGTTACTATTTTAATGTGTTCATGCTTCGAAGGCGGGCAGAACAGAATAGAAACGACCAATTGGCCATTGACAGTGATGATGATGAATGGCATAGTTGTGATGGCAATGTTGCAACTATAGAGGAAGAAGAAGACCATGTTACTAAGTCCCCAGTATATCAAGATGATGCTTGTCATGCTGATTGCCATGAAAATTATCTGCAAGATAATGATGAGTATGCCTCAGAAGAAACTTGTGCTGTTAATGAGACTGATTATTCAAAGTATGATCCTTCAGAAGTGCCTCACTTCATTGGTTTACCTTCTCTTAGCCAACAGCAGGATCAAATTGCTTGGAGAGAGAGGTTTGATGAAGAAGTTCAAGATGATTCACGCAAATCATGTGATGCAGGATTTGCCTCACAAGAGACCCAGGTGAAGACCGAGAATGGTGATCATGGTTATGGTAATTATAATGGGGAACACAATGGTTATAGCCAAGGATATGCTTTGGAGCCTTGTGGTGCAAAAGTATGGGATTTTGGCCCTTTCTTGCACTAA 1335 0.421 MVQKRPFDAEEIPEVSFKHPKQVGPSNQFMSFAESVFPEDGCHIPKTPVEYHKGAMEFETSFPGGISGSSWATSDTSEDFQLEPPLHLPFLPEYFSPERPTRTLVHYEDIYSILLKHPPPKLVSVGPNHQADVPVWDSSATSRSNVDEKLMGTCIIPMPQMELSIYDNEVVGKGRTDCSCEDRGSMRCVRQHIVEAREELMKTIGNEMFANLGLFEMGEQVADKWSEEEEQLFREVVFNSPGTLGKTFWDYLSIAFPLKTKKEIVSYYFNVFMLRRRAEQNRNDQLAIDSDDDEWHSCDGNVATIEEEEDHVTKSPVYQDDACHADCHENYLQDNDEYASEETCAVNETDYSKYDPSEVPHFIGLPSLSQQQDQIAWRERFDEEVQDDSRKSCDAGFASQETQVKTENGDHGYGNYNGEHNGYSQGYALEPCGAKVWDFGPFLH. 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01408 444 CDD SANT 224 272 IPR001005 -
Seca12g01408 444 PANTHER DNA BINDING PROTEIN 1 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01408 Seca-Chr12 14107058 14110431 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Seca12g01408 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01408 - - lang:109353694 578.17