Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g01387 | ATGAGAATTCAGAATAAAGGGGTAGTGAAGCTTCCATCAAGTTCTTACCTTTCCATTCTTTTCCTTATCCCCTTTAGCCTTGCTAACTATGCTTCTTCTGCCACTGAATCTTCTTTCTCACCTCCTGTTAATTATCTCATTGATTGTGGCTCCTCAACCCACACTCAACTCAAAGATGGTAGAACTTTCAAATCTGATCGTGAAACCACTTCTCTTTTATCCATAACTGAAGATTTGCAAATTTCAGTTGATTCCCTTAACATAAGTGTTTCTCCTTCTGTGCCTTTGTATAAGAGTGCTAGAGTTTTCACAGAGGAATCTACATACACTTTTTACATCTCCAAAACTGGTAGACTTTGGATTCGCCTTTACTTCTTCCCTCTCTCTCACCCTTCTTATGATCTAACTAGTGCTGTTTTCTCTGTCCAAACTGATCACTTTGTGCTCTTGCATGAGTTCTCTGTGAGGAACAATGATTCACTTGTTTTCAAGGAATATCTTGTTAATGTTTCTTATAGTAGATTTTCCCTCAAATTTAAGCCTAAGAAAAAATCCTTTGCATTCATCAATGCCATTGAGGTTGTCTCAGCCCCTGACACTCTTATATCTGATTCAGCAACTGCAATTTCCCCACTTAGAGAATTCAAAGGGTTATTGCAATCTGCTCTACAAGTATCCTATAGGGTAAATGTTGGTGGCCAAGCTATAACACCTGATATTGATACCTTGTCAAGAACATGGGAACCTGATAGCTCATATAATATTTTCCCACAAGGCTCTGAGAGTGTTGCTGTATCCAACAAAAGCATCAAATATCCACAAAATGGGGCTACTACACCTTTGATTGCTCCAAAGTTGGTTTATGCAACTGCTGCACATATGAAGGATCCTAGAGTTATGGAACCTAATTTCAATCTCAGTTGGATGATGAATGTGGACAAGAGCTACTCTTATTTGATAAGAATGCACTTTTGTGACATTGTGAGCATAAGTCTTAATCAATTGTACCTCAATGTATACATCAATGGGATTGAGGGTGTGTCAGCTTTAGACCTTTCATCTCAAACCAAATCTCTAGCCACTGCCTATTACAAGGACTTTGTGGTTAGTGCGTCCGCTATCACAAATGGTTCCATCTTAGTTCAAGTTGGACCAGCTAATCTCCAACAAGGTACTTCCAATGCAATTCTGAATGGAATTGAGGTGATGAAAATGAGCAACAATGCTGATAGCTTAGATGGTTTCTTTTCTGTTGATGGGAAATACAAAGGACCAAGTTCAACATGCACATCATTGAAAATTGCTGCTAGTATTGGCTTAGGATTGGCTCTAACAGCAATGGTTTTGCTAACAATTGTTTTTATAAAGTGGTTAAGGAGACCTCAAGGTTGGGAAGAGCACAAACGTTTCTCATCATGGCTCCTCCCTATCAATTCAGGATGCAAAAGCACCTCTCAGAACTCAAGCACATTTGGTTCCCACAAGAGCAACAATGTTCACTCTCCCTCTAGTTACCACTCCCCAAGAGGGCCTGAAAAGTTCTTTCCTTTCATTGAACTACAACAAGCCACACAGAACTTTGATGAAAAGAGAGTGATTGGTGTTGGAGGCTTTGGGAAAGTTTACCTTGGAACATTGAAAGATGGAACAAAGGTTGCTATAAAAAGAGGAAATGGTAGTTCAGAACAAGGCATCAATGAGTTCAGAACAGAATTAGACACACTTTCAAAGCTACGCCATCGCCACCTAGTCTCACTGATGGGGTTCTGTGATGAAAATTCAGAGATGGTTCTTGTATATGAGTACATGTCTAATGGCCCATTTCGTTCCCACCTTTATGGTTCCAATCTCCCTCCTTTGTCATGGCAAAAAAGGCTTGAAATATGCATTGGTGCTGCTCGTGGATTGCATTATCTCCACACTGGTGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAATATCCTCTTAGATGAAAACTATATTGCAAAAGTTTCAGACTTTGGCTTATCAAAAGTTGTCCCAGAGAAAGCTCAAGTGAGCACTGCTGTGAAGGGTAGTTTTGGATACCTTGATCCTGAATACTTCAGAAGCCAACAACTAACACAAAAATCTGATATTTACTCTTTTGGGGTAGTCCTCATTGAGGTGCTATGTGCTAGGCCAGTTGTTTGCCCAACACTACCAAGGGAACAAGCTAACTTGGCTGATTGGGCAATGAAACTTCACAGAATAGGCATGCTTCATAAGGCAATTGATCCACACATTGTTGACACTATAAGTCCTGAATCTTTCAAGATTTTTGTGTTGGTTGCTGAGAAATGTCTAGCAGATCATGGTGTTGATAGGCCTAGTATGGGGGATGTGTTGTGGCATTTAGAACATGCTTTGCAGATACAGGTAGCTGCTTCACAGATTAATGCAACTAAAAGCACATGTCCAAATTCTTTTCAACACCCAAATGAGTATGATAATATAGCATATCACTCAGGTGATCCCACAAGTGATGTGTCTGAGAGCACAAATGATAATTATGTTCTGTTTTCTCAGATGGTTAACTTTAATGGAAGGTAA | 2580 | 0.3984 | MRIQNKGVVKLPSSSYLSILFLIPFSLANYASSATESSFSPPVNYLIDCGSSTHTQLKDGRTFKSDRETTSLLSITEDLQISVDSLNISVSPSVPLYKSARVFTEESTYTFYISKTGRLWIRLYFFPLSHPSYDLTSAVFSVQTDHFVLLHEFSVRNNDSLVFKEYLVNVSYSRFSLKFKPKKKSFAFINAIEVVSAPDTLISDSATAISPLREFKGLLQSALQVSYRVNVGGQAITPDIDTLSRTWEPDSSYNIFPQGSESVAVSNKSIKYPQNGATTPLIAPKLVYATAAHMKDPRVMEPNFNLSWMMNVDKSYSYLIRMHFCDIVSISLNQLYLNVYINGIEGVSALDLSSQTKSLATAYYKDFVVSASAITNGSILVQVGPANLQQGTSNAILNGIEVMKMSNNADSLDGFFSVDGKYKGPSSTCTSLKIAASIGLGLALTAMVLLTIVFIKWLRRPQGWEEHKRFSSWLLPINSGCKSTSQNSSTFGSHKSNNVHSPSSYHSPRGPEKFFPFIELQQATQNFDEKRVIGVGGFGKVYLGTLKDGTKVAIKRGNGSSEQGINEFRTELDTLSKLRHRHLVSLMGFCDENSEMVLVYEYMSNGPFRSHLYGSNLPPLSWQKRLEICIGAARGLHYLHTGAAQSITHRDVKTTNILLDENYIAKVSDFGLSKVVPEKAQVSTAVKGSFGYLDPEYFRSQQLTQKSDIYSFGVVLIEVLCARPVVCPTLPREQANLADWAMKLHRIGMLHKAIDPHIVDTISPESFKIFVLVAEKCLADHGVDRPSMGDVLWHLEHALQIQVAASQINATKSTCPNSFQHPNEYDNIAYHSGDPTSDVSESTNDNYVLFSQMVNFNGR. | 860 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g01387 | 859 | ProSitePatterns | Protein kinases ATP-binding region signature. | 533 | 555 | IPR017441 | GO:0005524 | |
Seca12g01387 | 859 | SUPERFAMILY | Protein kinase-like (PK-like) | 499 | 796 | IPR011009 | - | |
Seca12g01387 | 859 | Gene3D | Phosphorylase Kinase; domain 1 | 486 | 602 | - | - | |
Seca12g01387 | 859 | SMART | serkin_6 | 527 | 795 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g01387 | 859 | MobiDBLite | consensus disorder prediction | 486 | 507 | - | - | |
Seca12g01387 | 859 | Gene3D | Transferase(Phosphotransferase) domain 1 | 603 | 817 | - | - | |
Seca12g01387 | 859 | CDD | STKc_IRAK | 533 | 796 | - | - | |
Seca12g01387 | 859 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 647 | 659 | IPR008271 | GO:0004672|GO:0006468 | |
Seca12g01387 | 859 | FunFam | Receptor-like protein kinase FERONIA | 603 | 817 | - | - | |
Seca12g01387 | 859 | Pfam | Protein tyrosine and serine/threonine kinase | 530 | 722 | IPR001245 | GO:0004672|GO:0006468 | |
Seca12g01387 | 859 | FunFam | receptor-like protein kinase FERONIA | 487 | 602 | - | - | |
Seca12g01387 | 859 | PANTHER | OS07G0166700 PROTEIN | 514 | 802 | IPR045272 | GO:0004714|GO:0006468 | |
Seca12g01387 | 859 | FunFam | Putative receptor-like protein kinase | 44 | 198 | - | - | |
Seca12g01387 | 859 | ProSiteProfiles | Protein kinase domain profile. | 527 | 800 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g01387 | 859 | MobiDBLite | consensus disorder prediction | 486 | 505 | - | - | |
Seca12g01387 | 859 | Pfam | Malectin-like domain | 47 | 405 | IPR024788 | - | |
Seca12g01387 | 859 | FunFam | Receptor-like protein kinase FERONIA | 222 | 407 | - | - | |
Seca12g01387 | 859 | Gene3D | - | 42 | 198 | - | - | |
Seca12g01387 | 859 | Gene3D | - | 222 | 407 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g01387 | Seca-Chr12 | 13823794 | 13826394 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g01387 | 35 | 812 | Receptor kinase-like Gene Family | AT5G61350 | 61.230 | 0.0 | 982 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Seca12g01387 | Malectin_like | 4.3e-37 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g01387 | - | - | gmx:100814982 | 1230.7 |