Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g01313 | ATGGCAGCCAAGCTGTTGCATTCTTTAGCAGATGATAACCCAGATTTACAGAAGCAAATAGGATGTATGACTGGGATTTTCCAACTCTTTGATCGTCACCATATTATCACTGCTCGCCGCATTAGCCAGAAAAGGCTTCCTCCTGGTAATTCCCACTTCAATTATGACAGCCTGCAAAGAGATTATTCTAATAGCATACACCAACGACGAACAGCAGCTGATATGAACTTAAACAAGGGTGTGAGTGAAAAACAAAGAATTTCAACAGAATCATCTAGAGCCTCATTCTCTTCTTCTTGTTCATCATCAATGTCCTCTCTGGAGTGTAAAGCTCAAGCAGATGCTCCTGACAGGATCATTTTTCCTGAAATTCCTATGAGAGACCCAGTTATGAACCTAAAAAGTACCTCTCCCCATTTAGGAAGTCACTCCCTTGACCTGAGGGATGTTGTGAAGGACTCCATGTATAGAGAGGCCAGAGGACTATCCAAAGAGAAAGCTTCCATTCGTGCTATGAAGCACAAGGATTCCCCAAGACCTCTTCATCTATCCAAATCTCTCAATGGAAAACAAAGTGTGCCTGTTGATCTAAAGGAGTCTATTCAAGTCCTTACTAAACTTAGAGAAGCACCTTGGCATTATGGTGAAGCAAAAGAACTTCCAAGATTATCATATGAAGTAAAAGATGGACAATGGCATTCAATCTCAAAGGATGCTCCTCGGTATTCTTATGATGGAAGAGGAACAAGAAGTTTGTCTTTTGAATCACCTGACACCACCAAATGTGCACCAAAGCTAAAAGAGCTTCCTAGACTTTCACTTGACAGTAGAGAAAGCTCATGGCGCACATACAGCTATGATTCAAAAGCTAGTCACCTCTCAAGAAATTTCAGTACTGGTGGAGCCTCAACCTCAGATGACAAAATCTCTAGTCTACAACAATTTTCAGCAAGCCAGAGCCGGCCACCTAGTGTTGTAGCAAAATTAATGGGCTTGGAAGCATTGCCAGAATCCTATTTGGTCAGTGATACTCAGTCAGGTTTGAGTGAAACTGGCTCAATTCAAGGTAATGGTCAGTTTTCAAAAGATGGATTCACAAGGCCACTTAGAGTTTCTAATTCCCTAAAAGGCTCATTGAAAGTTACCACTTCCCCAAGGAGGAAGAATCCTGATTTGGTTGTGAAACCTGTCTCAAGTTCAAGGTTTCCTATTGAACCAGCACCATGGAAGCAGAAGGATGGAATTCAAAGCTCTAAGAAACAAAGTTCCAGGGCCATAAAGGCTCCAGCTAGAACACTGGATTCATTTCCTTCAGTTTATAGTGAGATTGAGATGAGATTGAAGGATCTTGAATTTAAACAATCTGGAAGGGATCTCAGAGCACTAAAACGGATATTGGAAGCAATGCAAGTAAAGGGGCTGTTAGAGACCAAGAAAGAGGAACAAGCTTCCAATGATGTTGGAAATCAAAGATTCTATGAATCAAAATTGAGTCTAATTCAGGATTCTATGTCAGTGAGGCAACAAACAATCAGAGGGTCTGACTCAGCAAGGACTTTTGAATCTCCAATTGTGATAATGAAACCAGCAAAACTTGTAGACAAAACTGGATTTTCTGCTACTTCAGTCATTCCAATTGGTGGACTTTCTGATTCCAATAAACTCCACAGTGGTGGTGTACATGCACATATGAAAAAAGGGACAGCTTCTGGTCAAATAGCAAAAGATCAGTCTCCTAGAAACAGTCGCAGGGATGCTTCTACCAGTTCTAGTGATAAGAAAGCAAGTAGTAGTAAGACTATAAAATCAGCACAATCTCAACCAAGGTCTCAACAATTTGCAAAAGAAAATAGCTCAAGTTCAGTGAAGATTTCAGGATCTGTGAGCCCAAGAATGCAACAGAAGAAATTAGAGTTGGAGAGGAGATCTCGCCCACCTACCCCACCATCAGATTCAAATAAAGGCAGAAAGCAATCCAGTAAACATACAACAGAATCAGATTCTCCTGGGAGGAAACTGAGACGTAGAGTCCCTCATTCACAGCATAGTGATGACCAACTTAGTGAGATAAGCAATGAGTCAAGAAGTGTAAGTTGCCAAGAGGATGAAATATCTATGCAATCAGATAGTATAACTGTGGACTCAAAGATGGATATGGAAGTCACCAGCAGTTTACAATCTGCTGAAATTATTGATGGCCAAAGCCCATCTATGGAGGATATTGAGCAGTTGGTTTCAGGATCAATGAAGAAGAATTCAACTCTGAGGATGGATGAGGATGATTCATCTGCAGAACTTGCAATAGATGCCCCAGATCATCCAAGCCCTGTTTCAGTTCTTGATGTCTCAGAATACAAAGATCACGTGCCATCCCCTGTGAAGCTTATATCCAATGCTCACAAAGCTGGTGATGCTCAAGAATCTAAAGAGGAAGAGAATACAGATCATTGGAACCCTGCAGATAGCCTTTCAGTTAACTGCACAGGATCTGGAGAGATCAACCGCAAGAAATTGCAAAGCATAGATCACCTTGTTCAGAAGCTTAGACGGCTAAACTCAAGTCATGATGAAGCTAGAATTGATTACATAGCTTCCCTATGTGAAAACACAAATCCAGACCACAGATACATCTCGGAAATACTATTAGCTTCAGGTCTACTACTCAGAGATCTGAGTTCAGAATTTCTGACATTTCAACATCACTCATCAGGCCATCCCATTAACCCTGAGTTATTCCTTGTGTTGGAGCAGACCAAGGGAAGTAGTTTTCTTTCAAAAGAAGAAATCATCCTTGAAAAAGCTTCTTACATGAAGCTAAATTCAGAGAAGTTTCACAGGAAACTCATCTTTGATACTGTGAATGAAATTCTTGCTGCAAAATTAGGCTCTTCTCCAGAGTCATGGTTGAGGCCTAAATCTAATGGACTCACAAAGAAAATCCTCAATGCACAAAAGCTTCTTAAAGAACTGTGCTTTGAGATAGAAAAAATTCAATCCAAAAAGCCAGAGTGCAGTTTAGAAGATGAAGGGGATGAACTGAAAAGTGTGCTATGGGAAGATGTTATGCATCGCTCAGAAAGCTGGACAGATTTCAACTGTGAAATACCTGGGGTTGTGTTGGATGTTGAGAGACTAATATTTAAGGACTTAGTTAATGAAATTGTGATTGGTGAAGCAGAAGCAGCTAGTTTGAGATTCAAGTCAGTTAGACGCAGGAAGCTGTTTGGAAAGTAG | 3234 | 0.4069 | MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHHIITARRISQKRLPPGNSHFNYDSLQRDYSNSIHQRRTAADMNLNKGVSEKQRISTESSRASFSSSCSSSMSSLECKAQADAPDRIIFPEIPMRDPVMNLKSTSPHLGSHSLDLRDVVKDSMYREARGLSKEKASIRAMKHKDSPRPLHLSKSLNGKQSVPVDLKESIQVLTKLREAPWHYGEAKELPRLSYEVKDGQWHSISKDAPRYSYDGRGTRSLSFESPDTTKCAPKLKELPRLSLDSRESSWRTYSYDSKASHLSRNFSTGGASTSDDKISSLQQFSASQSRPPSVVAKLMGLEALPESYLVSDTQSGLSETGSIQGNGQFSKDGFTRPLRVSNSLKGSLKVTTSPRRKNPDLVVKPVSSSRFPIEPAPWKQKDGIQSSKKQSSRAIKAPARTLDSFPSVYSEIEMRLKDLEFKQSGRDLRALKRILEAMQVKGLLETKKEEQASNDVGNQRFYESKLSLIQDSMSVRQQTIRGSDSARTFESPIVIMKPAKLVDKTGFSATSVIPIGGLSDSNKLHSGGVHAHMKKGTASGQIAKDQSPRNSRRDASTSSSDKKASSSKTIKSAQSQPRSQQFAKENSSSSVKISGSVSPRMQQKKLELERRSRPPTPPSDSNKGRKQSSKHTTESDSPGRKLRRRVPHSQHSDDQLSEISNESRSVSCQEDEISMQSDSITVDSKMDMEVTSSLQSAEIIDGQSPSMEDIEQLVSGSMKKNSTLRMDEDDSSAELAIDAPDHPSPVSVLDVSEYKDHVPSPVKLISNAHKAGDAQESKEEENTDHWNPADSLSVNCTGSGEINRKKLQSIDHLVQKLRRLNSSHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLSSEFLTFQHHSSGHPINPELFLVLEQTKGSSFLSKEEIILEKASYMKLNSEKFHRKLIFDTVNEILAAKLGSSPESWLRPKSNGLTKKILNAQKLLKELCFEIEKIQSKKPECSLEDEGDELKSVLWEDVMHRSESWTDFNCEIPGVVLDVERLIFKDLVNEIVIGEAEAASLRFKSVRRRKLFGK. | 1078 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g01313 | 1077 | Pfam | Domain of unknown function (DUF4378) | 873 | 1053 | IPR025486 | - | |
Seca12g01313 | 1077 | PANTHER | LONGIFOLIA PROTEIN | 1 | 1075 | IPR033334 | GO:0051513 | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 346 | 428 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 690 | 709 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 799 | 823 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 591 | 632 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 555 | 709 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 161 | 187 | - | - | |
Seca12g01313 | 1077 | Pfam | DUF761-associated sequence motif | 317 | 339 | IPR032795 | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 655 | 689 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 346 | 385 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 803 | 817 | - | - | |
Seca12g01313 | 1077 | MobiDBLite | consensus disorder prediction | 161 | 181 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g01313 | Seca-Chr12 | 12858678 | 12863737 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g01313 | 139 | 1076 | TRM (TON1 Recruiting Motif) Superfamily | AT1G74160 | 48.813 | 0.0 | 676 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g01313 | - | - | gmx:100787391 | 1372.07 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca12g01313 | 12 | 12858678 | 12863737 | Seca12g01313 | 12 | 12858678 | 12863737 | ECH | |
Seca12g01313 | 12 | 12858678 | 12863737 | Seca4g03379 | 4 | 58692255 | 58698416 | PCT |