Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01307 ATGTCATCAGAACTCTGTTCCATGTTCTTTCAACCACCTTCATGTTCAACCATACTCACTTTTGATGTCTTTCTTGGTCTCCTTTTCCTCATAGTTGTATTTGGCTACTTGCTAGTACCAGGTGGTCTTGCTTGGGCTCTTTCAAGGCTCCGTTTGGAGCCACCAAAAACAACAAGTGGCAACTCTGTTGTTGTTATTCCTGGACCTTCAGGAATTCCTGTGCTTGGTCTTGTTTTAGCTTTCACAGGGACTTTGACTCATAGAGTCCTTGCTAAGCTCGCAGATACCTTAAAGGCTAAACCTTTGATGGCATTCTCAATTGGGTTTACTCGTTTTGTAATCTCCTCTGAACCAGACACTGCTAAAGAGATTTTGAACAGTTCAGCTTTTGCGGATCGTCCTGTTAAGGAATCTGCTTATGAGCTTCTCTTTCACAGAGCAATGGGGTTCGCACCGTATGGTGAGTACTGGAGGAACCTGAGGAGGATTTCTGCAACTCACATGTTTTCTCCTCGGAGGATTGCTTCTTCTGGGGAGTTTAGGGCCAGGGTTGGGGCATGGATGGTGAGGGAGATTAAGGGGTTGGTGGAAAAGAAGCAGGGTGAGGTGAAGGTGAAGGAAGTGTTGCATTTTGGTTCATTGAATAGCATGATGATAAGTGTGTTTGGGAGGAGTTATGAGTTTGGTGAGGGGGGTGATGGGTGTGAGCTTGAGGAGTTGGTGAGGGAAGGGTATGATCTGCTTGGGGTTTTCAATTGGAGTGATCACTTCCCTCTCTTGGGTTGGTTGGACTTGCAAGGTGTGAGAAGGAGGTGTAGGAATTTGGTGAATAAAGTCAATGTTTTTGTTGGGAAAATCATATGGGAGCATAGGATGAAAAGGGTTCATAAAGGTGAAGAAGATAGGACCATAATCATGGATGAGAGCTCTGGTGATTTTGTTGATGTGCTTCTAGATTTGGAGAAAGAGAACAGAATTCAACACTCTGATATGGTTGCTGTTTTGTGGGAAATGATCTTTAGAGGGACAGATACAGTAGCAATCCTTCTAGAGTGGATACTTGCTAGGATGGTTCTACACCCAGAAGTCCAAGCTAAGGCTCAGTCAGAAATTGACTCTGTTGTTGGCTCTGGCCGCACTGTGAATGACATGGATCTTCCCAACCTTCCTTACCTACATGCCATAGTGAAGGAAACCTTAAGGATGCATCCACCAGGTCCCCTTCTTTCTTGGGCCAGGCTTGCCATCCATGACACTCACATAGGCCACCACTTCATTCCAGCTGGCACTACTGCCATGGTTAACATGTGGGCCATCACTCATGACCAACAATTTTGGTCTGATCCACAACAATTCAAACCAGAGCGTTTTCTTCATGAGGATGAAAATGTGTCAATTATGGGGTCTGATCTTAGGCTAGCACCTTTTGGTTCTGGAAGAAGGGTGTGCCCTGGAAAAGCATTGGGCTTAGCCACTGTTGAGCTTTGGCTTGCTATGTTCTTACAGAGTTTCAAATGGATGCCTTGTGATTCTGGTGTGGACTTGTCTGAATGCTTGAAGCTCTCTTTGGAGATGAAATGCTCTCTGGTTTCCAAAGCTATCATACGCCCTATGCATCCATCAGAATAA 1629 0.4512 MSSELCSMFFQPPSCSTILTFDVFLGLLFLIVVFGYLLVPGGLAWALSRLRLEPPKTTSGNSVVVIPGPSGIPVLGLVLAFTGTLTHRVLAKLADTLKAKPLMAFSIGFTRFVISSEPDTAKEILNSSAFADRPVKESAYELLFHRAMGFAPYGEYWRNLRRISATHMFSPRRIASSGEFRARVGAWMVREIKGLVEKKQGEVKVKEVLHFGSLNSMMISVFGRSYEFGEGGDGCELEELVREGYDLLGVFNWSDHFPLLGWLDLQGVRRRCRNLVNKVNVFVGKIIWEHRMKRVHKGEEDRTIIMDESSGDFVDVLLDLEKENRIQHSDMVAVLWEMIFRGTDTVAILLEWILARMVLHPEVQAKAQSEIDSVVGSGRTVNDMDLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTHIGHHFIPAGTTAMVNMWAITHDQQFWSDPQQFKPERFLHEDENVSIMGSDLRLAPFGSGRRVCPGKALGLATVELWLAMFLQSFKWMPCDSGVDLSECLKLSLEMKCSLVSKAIIRPMHPSE. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01307 542 Gene3D Cytochrome P450 55 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 FunFam Cytochrome P450 78A5 58 536 - -
Seca12g01307 542 Pfam Cytochrome P450 67 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 330 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 350 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 212 230 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 483 506 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS E-class P450 group I signature 473 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PANTHER CYTOCHROME P450 78A7-RELATED 19 536 - -
Seca12g01307 542 SUPERFAMILY Cytochrome P450 66 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 476 485 IPR017972 GO:0005506|GO:0016705
Seca12g01307 542 CDD CYP78 98 529 - -
Seca12g01307 542 PRINTS P450 superfamily signature 474 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS P450 superfamily signature 394 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS P450 superfamily signature 483 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g01307 542 PRINTS P450 superfamily signature 341 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01307 Seca-Chr12 12781978 12784722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01307 1 536 Cytochrome P450 AT1G74110 64.037 0.0 686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01307 K20619 - gmx:100811042 815.453