Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01271 ATGGAACACAATAATGATGAAGAACTCCATGAAGTACCTTATTCTGCTTCTTTCACACAGTACCTTCACTATCCTTCTCCAACCCAAAAACCCATCTTTACCTCAAGCCTCCAGAACATGGAAACTGGGGAATGCCATTCTTTGACCCCTTTGGATCCATCTCATGGTTTACATCATATTCCATTTTACCCCTCCCAGCTACAACTTCCCAGCAACAGCAACAGTCCAATTCAAATCCCAGTCCACAAATCCTCTCCCAATACATCATCAAACAGTAACAACAACAACTCTGATGAAGCAAAGGCTCTCCTTGATGACAGAAAGAAGAAAAGGATGTTCTCCAACAGAGAATCTGCTCGCAGATCAAGAATGAGAAAGAAGCAACAGATTGAAGTCCTGCAGTATCATGTGGATCATCTGCAGGCATTAAACCATCAACTGTCTCAAAAGATCATTTACTTGTTGGAATGTAACCAACAAATCCACCAACAAAATGCTCAACTTAAAGACAAAGTTTCATCTCTTCAAGTGGCACTCTCTGACTTATTAGTCCCTTCTGGCAATGCTGAGTTACCACCACACATCCCCAATGGTTTCCTAGTTGAGCCTTCAACTAGACCAATTACAAGTTCCAGAGCATAG 642 0.4174 MEHNNDEELHEVPYSASFTQYLHYPSPTQKPIFTSSLQNMETGECHSLTPLDPSHGLHHIPFYPSQLQLPSNSNSPIQIPVHKSSPNTSSNSNNNNSDEAKALLDDRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQALNHQLSQKIIYLLECNQQIHQQNAQLKDKVSSLQVALSDLLVPSGNAELPPHIPNGFLVEPSTRPITSSRA. 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01271 213 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 105 168 IPR004827 GO:0003700|GO:0006355
Seca12g01271 213 Coils Coil 158 178 - -
Seca12g01271 213 FunFam BZIP transcription factor 105 156 - -
Seca12g01271 213 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 62 188 IPR044521 -
Seca12g01271 213 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 110 125 IPR004827 GO:0003700|GO:0006355
Seca12g01271 213 MobiDBLite consensus disorder prediction 62 125 - -
Seca12g01271 213 MobiDBLite consensus disorder prediction 100 125 - -
Seca12g01271 213 Gene3D - 106 159 - -
Seca12g01271 213 SMART brlzneu 103 167 IPR004827 GO:0003700|GO:0006355
Seca12g01271 213 Pfam bZIP transcription factor 107 165 IPR004827 GO:0003700|GO:0006355
Seca12g01271 213 CDD bZIP_plant_GBF1 108 156 IPR045314 GO:0003700|GO:0006355
Seca12g01271 213 MobiDBLite consensus disorder prediction 65 99 - -
Seca12g01271 213 SUPERFAMILY Leucine zipper domain 107 163 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01271 Seca-Chr12 12411492 12412133 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01271 105 210 bZIP Transcription Factor Family AT5G60830 54.630 3.12e-30 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Seca12g01271 bZIP_1 1.1e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01271 - - aprc:113874797 330.487