Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01233 ATGGCCACTCTCTCCTTCAAAGCCTCATACCCATTTTTCCTTTGCTTGATTCTTTTCTGTGGCTCTCAAGTATTGCTTATCAATTGTACTGAATTTGAAGTTGGTGGTAAAGATGGTTGGGTTGTCCCAAAATCAAAGGACAATTCTGATATGTATAACCAATGGGCATCCCAAAACAGATTCAAAGTTAATGACACTGTTCGTGTTTCAAGTATGAGAAAGATTCTGTTTTGGTGGTGA 240 0.3833 MATLSFKASYPFFLCLILFCGSQVLLINCTEFEVGGKDGWVVPKSKDNSDMYNQWASQNRFKVNDTVRVSSMRKILFWW. 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01233 79 ProSiteProfiles Phytocyanin domain profile. 30 79 IPR003245 GO:0009055
Seca12g01233 79 SUPERFAMILY Cupredoxins 28 68 IPR008972 -
Seca12g01233 79 Gene3D - 27 75 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01233 Seca-Chr12 12102188 12103378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01233 13 68 Phytocyanin Superfamily AT1G48940 53.571 3.84e-19 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01233 - - var:108327897 102.449