Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01225 ATGCTAAGAGCATTTCAAGATGCTATTAGAGACTACTGCACACCAGATGATAAAATCCTTTTTAGGGATTTAACTTCAAAATTCAGTAGTTATGTATCATTTTTTACTGAATGCAGACCACTTTCTATGAGCATGGGAAATGCAATTAGGTTTGTTAAGAGTCGTATTGTCAATTTGCCTTTAAGTCTTTCTGAATCTGAGGCAAAAACAGCTCTGTCTTCTGATATTGACCGGTTCATTAATGAGAAAATAATTCTTGCTGATAAGGTGATTGTTAGACATGCTTTTACAAAGGTTAAGGATGGGGATGTTCTTCTCACATATGGATTGTCATGTGTGGTTGAGATGATTCTTTTTTATGCCCATGATCTTGGAAAACAGTTCCGTGTTGTGGTGGTAGACTCGCGGCCAAAGCTTGAAGGCCAGGCCTTACTTCGTAGGCTAGTGGCTAAGGGCCTGAATTGCACATACACTCATATAAACGCTGTTTCTTACATAATGCACGAGGTCACACGGGTTTTTCTTGGAGCTTCAGCAGTTTTGTCTAATGGAACTGTATATTCTCGGGTTGGGACTTCATGTGTTGCAATGGTGGCTCATGCATTTCGTGTTCCTGTATTGATCTGTTGTGAAGCATATAAATTTCATGAAAGGGTGCAACTAGATTCACTTTGTTCGAATGAACTAGGTGATCCAGATGCTGTTGCTAGAGTTCCAGGACGAATGGATGTCAATTATCTGGACAATTGGACTAGTGAAGACAATTTGAGGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCTGCCATTGTTACGGATTATGGCATGCTTCCTCCTACAAGTGTGCCTGTAATTGTACGTGAATATCGCGAGCACTTATCGCGAGCCCTGCAATCCATTTAG 915 0.4022 MLRAFQDAIRDYCTPDDKILFRDLTSKFSSYVSFFTECRPLSMSMGNAIRFVKSRIVNLPLSLSESEAKTALSSDIDRFINEKIILADKVIVRHAFTKVKDGDVLLTYGLSCVVEMILFYAHDLGKQFRVVVVDSRPKLEGQALLRRLVAKGLNCTYTHINAVSYIMHEVTRVFLGASAVLSNGTVYSRVGTSCVAMVAHAFRVPVLICCEAYKFHERVQLDSLCSNELGDPDAVARVPGRMDVNYLDNWTSEDNLRLLNLMYDATPSDYVSAIVTDYGMLPPTSVPVIVREYREHLSRALQSI. 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01225 304 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 1 295 - -
Seca12g01225 304 Gene3D - 87 293 IPR042529 -
Seca12g01225 304 Pfam Initiation factor 2 subunit family 1 283 IPR000649 GO:0044237
Seca12g01225 304 SUPERFAMILY NagB/RpiA/CoA transferase-like 1 293 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01225 Seca-Chr12 12023674 12028881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01225 1 297 Eukaryotic Initiation Factors Gene Family AT5G38640 74.832 1.53e-171 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01225 K03680 - gmx:100795256 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01225 12 12023674 12028881 Seca12g01225 12 12023674 12028881 ECH