Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g01208 | ATGTCATCAAGTGGAACCATTTGGAGCTATGAAGAAGAAAAAGCATTTGAGAATGCCATCGCTATGCATTGGATTGATGAAGCCTCAAAAGAGCAATGGGAAAAGATTGCTTCAGCTGTCCCTAACAAAAGCATGGAAGAAGTGAAGCAACATTACCAGGTACTTGTAGAGGATGTAAGTGCAATTGAGGCAGGTCATATATCATTTCCAAACTATGTTGTAGAGGAAACTACATCTTCAAATAAGGATCTCCATGGCTCTTCCAAGTCTACAACTTCAGATAAGAGATCAAATTGTAATTATGGAAGTGGGTTTTCTGGATTAGGACATGACTCCACCACACATAGTGGTAAAGGAGGATTATCAAGGTCATCAGAACAAGAAAGGAGAAAAGGAATTCCATGGACAGAGGAGGAGCACAGGTTATTTTTACTTGGTCTAGACAAATTTGGAAAAGGAGATTGGAGAAGCATTTCAAGGAACTTTGTGATTTCTAGGACTCCAACTCAAGTGGCAAGTCATGCACAGAAGTACTTCATAAGATTGAATTCCATGAATAGAGACAGAAGGAGGTCTAGTATACATGATATTACAAGTGTAAACAATGGAGATGTGGCTAATAATCAGGCACCAATTACAGGACAGCATAGTAGCACAATCCCTTCAAGTACAATGGCTGTAGGACAATCACTGAAGCATAGAGTACATCAGCCCCATATACCAACTGGTTTAGGCATGTATGGAACACCAGTTGGGCATCCTGTGGCTGCTCCTCCTGGCCATATGGCATCTGCAGTTGGGACTCCAGTCATGCTTCCTCCTGGACCCCACCCTCATCCTCACCCCCATCCCCATCCCCATCCTCATCCACCTTATGTTGTCCCTCTTGCTTACCCAATGGCACCTCCAACAATGCACCAATAA | 924 | 0.4297 | MSSSGTIWSYEEEKAFENAIAMHWIDEASKEQWEKIASAVPNKSMEEVKQHYQVLVEDVSAIEAGHISFPNYVVEETTSSNKDLHGSSKSTTSDKRSNCNYGSGFSGLGHDSTTHSGKGGLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVANNQAPITGQHSSTIPSSTMAVGQSLKHRVHQPHIPTGLGMYGTPVGHPVAAPPGHMASAVGTPVMLPPGPHPHPHPHPHPHPHPPYVVPLAYPMAPPTMHQ. | 308 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g01208 | 307 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 4 | 301 | - | - | |
Seca12g01208 | 307 | ProSiteProfiles | SANT domain profile. | 3 | 52 | IPR017884 | - | |
Seca12g01208 | 307 | CDD | SANT | 8 | 56 | IPR001005 | - | |
Seca12g01208 | 307 | FunFam | transcription factor MYB1R1 | 133 | 184 | - | - | |
Seca12g01208 | 307 | CDD | SANT | 134 | 179 | IPR001005 | - | |
Seca12g01208 | 307 | SMART | sant | 4 | 58 | IPR001005 | - | |
Seca12g01208 | 307 | SMART | sant | 131 | 181 | IPR001005 | - | |
Seca12g01208 | 307 | Gene3D | - | 1 | 69 | - | - | |
Seca12g01208 | 307 | ProSiteProfiles | Myb-like domain profile. | 127 | 179 | IPR001005 | - | |
Seca12g01208 | 307 | SUPERFAMILY | Homeodomain-like | 6 | 61 | IPR009057 | - | |
Seca12g01208 | 307 | ProSiteProfiles | Myb-like domain profile. | 8 | 56 | IPR001005 | - | |
Seca12g01208 | 307 | MobiDBLite | consensus disorder prediction | 78 | 133 | - | - | |
Seca12g01208 | 307 | SUPERFAMILY | Homeodomain-like | 129 | 184 | IPR009057 | - | |
Seca12g01208 | 307 | ProSiteProfiles | SANT domain profile. | 135 | 183 | IPR017884 | - | |
Seca12g01208 | 307 | Pfam | Myb-like DNA-binding domain | 134 | 179 | IPR001005 | - | |
Seca12g01208 | 307 | Pfam | Myb-like DNA-binding domain | 8 | 55 | IPR001005 | - | |
Seca12g01208 | 307 | MobiDBLite | consensus disorder prediction | 78 | 121 | - | - | |
Seca12g01208 | 307 | FunFam | Transcription factor SRM1 | 1 | 69 | - | - | |
Seca12g01208 | 307 | Gene3D | - | 133 | 185 | - | - | |
Seca12g01208 | 307 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 131 | 181 | IPR006447 | GO:0003677 | |
Seca12g01208 | 307 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 127 | 183 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g01208 | Seca-Chr12 | 11857237 | 11858881 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Seca12g01208 | Myb_DNA-binding | 8.9e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g01208 | - | - | gmx:778049 | 535.413 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca12g01208 | 12 | 11857237 | 11858881 | Seca12g01208 | 12 | 11857237 | 11858881 | ECH |