Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g01158 | ATGGAGGACAGGAAAGTGCACACGATCGCTGTTATATCAGTGATTGCTCTGATCATTGTCATAATCGTTGCTCGTGTCTCCTTAAAGCTCTCAAGAGTTTTCTTCCTCATTTGTGGTGCTACTGTTGCTGTGATTCTTGCTGTCTTTTGTTGTTTACTCATCAGGCATCGTTACAACCGAAGAAGAAAGTTATTGGAGTCAAGATTCAAATCAGAAGGCAGAGAGCTTCGAATAGAGTACAGTTTCTTAAGAAAAGTTGCTGGGGTTCCTATAAAGTTTCGATACAAGGAGCTTGAGGAAGCAACCGATGGTTTTCAAGCACTTTTAGGAAAAGGGTCCTCTGCTTCTGTTTTCAAAGGCATTCTCAATGATGGTACTTCAGTTGCTGTGAAACGAATTGATGGAGAGGAAAGAGGAGAGAAGGAGTTCAGATCAGAAGTTGCAGCCATTGCTAGTGTTCAACATGTGAACCTTGTAAGACTATTTGGCTATTGTAATGCTCCTACAGCACCTAGGTACCTTGTTTATGAGTATATTCCAAATGGGTCTTTGGAGGAAAATAGGACACGTCGTGGTGGGTGTTTACCATGGAATTTGAGGTATAAAGTTGCAATTGATGTTGCCAAGGCACTTAGTTACCTTCACCATGATTGTAGATCAAGGATTTTGCACCTTGATGTGAAGCCAGAGAATATACTTCTTGATGAGAATTATAAAGCGCTTGTTTCTGATTTTGGTCTCTCAACTCTTATTGGGAAGGATGTGAGTCAAGTTATGACAACAATAAGGGGAACTAGAGGGTACTTAGCCCCTGAATGGCTCTTAGAAAGGGGTGTTTCAGAGAAAACTGATATATATAGTTATGGGATGGTTCTGTTGGAGATAATTGGAGGGAGGAGAAATGTGTGTAGGGTAGAAGATCCTAGGGATAAGTCTAAGACAAAATGGCATTTTTTTCCAAAGATTGTGAATGAGAAAGTGAGAGAAGGGAAGTTTATGGAAATTGTGGATTCTAGGCTAGTGGAAAGAGGGGATGTTGATGAGAGTGAGGTGAGTAGATTGGTGTATATTGCTTTGTGGTGTATACAAGAGAAACCAAGATTGAGGCCTAGCATGGCACAAGTGGTGGATATGCTTGAAGGGCGTGTGAGTGTGGAAGATCCTCCAGGTACTAGAATGATTCTTGTTGACTTGTTAGATGAAGAACCTGCAGATCATAATAATCTTGCAAGGTTATTGACATCTATGTCCAGCCAGGAGGATTGTACATCTACATACTCCATGGGAACCACTATTTTATCTGGTAGATAA | 1311 | 0.4088 | MEDRKVHTIAVISVIALIIVIIVARVSLKLSRVFFLICGATVAVILAVFCCLLIRHRYNRRRKLLESRFKSEGRELRIEYSFLRKVAGVPIKFRYKELEEATDGFQALLGKGSSASVFKGILNDGTSVAVKRIDGEERGEKEFRSEVAAIASVQHVNLVRLFGYCNAPTAPRYLVYEYIPNGSLEENRTRRGGCLPWNLRYKVAIDVAKALSYLHHDCRSRILHLDVKPENILLDENYKALVSDFGLSTLIGKDVSQVMTTIRGTRGYLAPEWLLERGVSEKTDIYSYGMVLLEIIGGRRNVCRVEDPRDKSKTKWHFFPKIVNEKVREGKFMEIVDSRLVERGDVDESEVSRLVYIALWCIQEKPRLRPSMAQVVDMLEGRVSVEDPPGTRMILVDLLDEEPADHNNLARLLTSMSSQEDCTSTYSMGTTILSGR. | 437 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g01158 | 436 | ProSiteProfiles | Protein kinase domain profile. | 103 | 383 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g01158 | 436 | Pfam | Protein kinase domain | 108 | 377 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g01158 | 436 | SMART | serkin_6 | 103 | 379 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g01158 | 436 | Gene3D | Phosphorylase Kinase; domain 1 | 68 | 178 | - | - | |
Seca12g01158 | 436 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 33 | 389 | - | - | |
Seca12g01158 | 436 | ProSitePatterns | Protein kinases ATP-binding region signature. | 109 | 131 | IPR017441 | GO:0005524 | |
Seca12g01158 | 436 | FunFam | Putative receptor-like protein kinase | 179 | 387 | - | - | |
Seca12g01158 | 436 | SUPERFAMILY | Protein kinase-like (PK-like) | 86 | 380 | IPR011009 | - | |
Seca12g01158 | 436 | FunFam | Putative receptor-like protein kinase | 70 | 178 | - | - | |
Seca12g01158 | 436 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 222 | 234 | IPR008271 | GO:0004672|GO:0006468 | |
Seca12g01158 | 436 | Gene3D | Transferase(Phosphotransferase) domain 1 | 179 | 388 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g01158 | Seca-Chr12 | 11199983 | 11201314 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g01158 | 1 | 391 | Receptor kinase-like Gene Family | AT5G20050 | 65.835 | 0.0 | 511 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Seca12g01158 | Pkinase | 2.6e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g01158 | - | - | gmx:100779485 | 744.191 |