Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01093 ATGTCATCATCAATGGCTTGCCATTCCCTCAACATTGATATTGAAGAGATTCAAAGCCCCCAGTCCCACGTTTCTTCTGACCTTAACTCCACGAGTCCTCGTTCACCCACACCTTCGGAACATGAATGGGTTCCAAATTGTGTTGAAGAATTGAAGCCCAAGGTTGGGCAACAATTTGATACTTTAAAAGAAGGTGAAGAATTTTACAAAAGGTACGCACATAATGTTGGATTTAGTGTCCGTTGCTCATCGGAAACTAAAGATAAAAATGGTGTGAAGCGTTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACATACCAGATAAGGAAAAAGTTGGGGAACAAAGCAACTCAACTATTAAGTCTAGGAGAAGGAGTCTTACAAGAGAAGGGTGCAATGCAAAGGCCGTTTTCAAATTGGTAGGGGAAGGTAAATATGAGCTCATTCGATTTCATGAAAGTCACACACATGTACTCGCTTCACCTATGAAGAGACAATTTCTAAGATCACCAAGAAAGGTAAATCCTGTTCATAAAAGTTTGTTGCATGCATATAATAGAGCAAATATTGGGCCTTCAAAAACATATCACTTGTTGAAAGAACAATTTGGGGGTTATGAAAATGTTGGGTGCACACAAAGGGATCTTCAAAATTATTCAAGAGATTTAAAGACCCTAATTAAAGATTCCGATGCACATGTTTTTATTGACAACTTTAGGAGGAAGCAAGAAATTAATCCATCATTCTACTATGCATATGAGGTGGATGAAGAAGGTAGACTAAAACATGTTTTCTGGGCGGATGGCATTTCTAGGAAAAATTATTCCTTATTTGGGGATCTTGTTTCATTTGATACTACATATGGAACAAACAAATATTCAATGATTTTTGCACCATTTACTGGAGTAAACCACCATAGGCAATGTGTTACGTTTGGTGCGGCCTTTTTAGCAGATGAGAAGGTTGAATCATTCATTTGGTTGTTTGACAAGTTTTTAGAAGCAATGGGGGACATCAACGAAATCTTTTAA 1032 0.375 MSSSMACHSLNIDIEEIQSPQSHVSSDLNSTSPRSPTPSEHEWVPNCVEELKPKVGQQFDTLKEGEEFYKRYAHNVGFSVRCSSETKDKNGVKRWKYFVCSKEGYIPDKEKVGEQSNSTIKSRRRSLTREGCNAKAVFKLVGEGKYELIRFHESHTHVLASPMKRQFLRSPRKVNPVHKSLLHAYNRANIGPSKTYHLLKEQFGGYENVGCTQRDLQNYSRDLKTLIKDSDAHVFIDNFRRKQEINPSFYYAYEVDEEGRLKHVFWADGISRKNYSLFGDLVSFDTTYGTNKYSMIFAPFTGVNHHRQCVTFGAAFLADEKVESFIWLFDKFLEAMGDINEIF. 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01093 343 PANTHER OS01G0519700 PROTEIN 49 338 - -
Seca12g01093 343 MobiDBLite consensus disorder prediction 18 42 - -
Seca12g01093 343 MobiDBLite consensus disorder prediction 18 39 - -
Seca12g01093 343 Pfam MULE transposase domain 282 338 IPR018289 -
Seca12g01093 343 Pfam FAR1 DNA-binding domain 67 159 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01093 Seca-Chr12 10569790 10571453 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca12g01093 FAR1 1.5e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01093 - - mtr:112420857 483.026