Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01028 ATGGCGCCATCGATTCTCCCAGATCTCGGAGCTGAGATTCTCATTCCCGTTTGCGCCGTCATTGGAATAGGGTTTGCCCTCTTCCAGTGGGTCCTCGTCTCTAACGTTAAGCTGTCTGCTGCCAGAGACGCTTCTTCTGACGGCAAGAATGGCTACAACGATTACCTCATCGAAGAAGAGGAGGGCATCAACGACCACAACGTCGTTCTCAAATGCGCTGAAATCCAGAACGCCATTTCCGAAGGAGCAACCTCATTCCTTTTCACTGAATACAAGTATGTGGGAATCTTCATGGCCGCCTTTGCCATTTTGATATTCCTTTTCCTTGGCTCTGTGGAAGGATTCAGCACAAGCTACCAGCCTTGCACCTATGATAAAACTAAGATGTGTAAACCAGCTCTTGCCACTGCCATTTTCAGCACCATATCCTTCCTGCTTGGTGGCATCACATCAGTTATTTCTGGTTTCCTTGGAATGAAAATTGCAACTTATGCTAATGCAAGAACCACCTTGGAGGCCAGAAAGGGTGTTGGGAAGGCTTTCATTACAGCATTTAGATCAGGTGCAGTTATGGGATTTCTTCTTGCTGCCAATGGTCTTTTGGTTCTTTACATTGCCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATCACTGGCTATGGTCTTGGTGGATCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTTGGCAAGGTTGAAAGAAACATTCCCGAGGATGATCCAAGAAATCCAGCTGTGATTGCTGATAATGTCGGTGATAATGTTGGTGATATTGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCTGAGTCATCCTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGACGAATCATGAGCTGACTGCCATGCTATACCCTCTCATCATCAGTTCTGTGGGCATCCTTGTCTGTTTGCTTACCACCTTATTTGCAACTGACTTTTTTGAGATCAAGGTTGTGAAGGAAATTGAGCCAGCATTGAAAAAACAGCTCATTATTTCAACAGCGTTGATGACCATTGGGATTGCCATTGTTAGTTGGATTGCACTCCCATCTTCCTTCACTATCTTCAATTTTGGAGAGCAAAAAGTCGTCAAGAGCTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTCTGGGCAGGTCTTATCATTGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGCCCTGTGCAAGATGTTGCAGACTCCTGCAGGACTGGCGCTGCTACTAATGTTATCTTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATCTTTGCTATTGCAGTCAGTATTTTTGTTAGTTTCAGCTTTGCTGCCATGTATGGCATTGCTGTTGCTGCACTTGGGATGTTGAGTACTATAGCTACTGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGGATGAGTCACAGAATTCGAGAGAGAACTGATGCCCTTGATGCCGCAGGAAACACAACTGCAGCTATTGGGAAGGGATTTGCCATTGGTTCTGCCGCCCTTGTGTCTCTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTTCAACAGTTGATGTGTTGACTCCAAAGGTTTTTATTGGTTTGATCGTGGGTGCTATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATCCCAGGCTTGATGGAGGGAACTGCTAAGCCTGACTATGCTACATGTGTTAAGATCTCCACTGATGCTTCTATTAAAGAAATGATTCCACCCGGTGCTCTTGTCATGCTCACACCCCTTGTTGTAGGGATCTTTTTTGGTGTAGAAACCCTTTCTGGTGTCCTGGCTGGATCTCTGGTGTCTGGTGTACAGATTGCTATCTCTGCATCCAACACTGGTGGTGCTTGGGACAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCAAGAACCCTTGGTCCAAAGGGGTCAGATCCTCACAAAGCAGCTGTTATTGGTGACACCATTGGGGACCCTTTGAAGGATACATCTGGACCTTCACTCAACATCCTTATCAAGCTGATGGCCGTTGAGTCACTTGTTTTTGCTCCCTTCTTTGCTACACATGGTGGCTTACTCTTCAAAATCTAA 2292 0.4586 MAPSILPDLGAEILIPVCAVIGIGFALFQWVLVSNVKLSAARDASSDGKNGYNDYLIEEEEGINDHNVVLKCAEIQNAISEGATSFLFTEYKYVGIFMAAFAILIFLFLGSVEGFSTSYQPCTYDKTKMCKPALATAIFSTISFLLGGITSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGTNHELTAMLYPLIISSVGILVCLLTTLFATDFFEIKVVKEIEPALKKQLIISTALMTIGIAIVSWIALPSSFTIFNFGEQKVVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI. 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01028 763 NCBIfam V-type H(+)-translocating pyrophosphatase 11 759 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g01028 763 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g01028 763 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 754 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g01028 763 PIRSF H+-PPtase 13 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Seca12g01028 763 Pfam Inorganic H+ pyrophosphatase 46 749 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01028 Seca-Chr12 9829195 9834346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01028 1 627 Primary Pumps ATPases AT1G15690 87.500 0.0 1121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01028 K23025 - gmx:100775864 1430.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01028 12 9829195 9834346 Seca12g01028 12 9829195 9834346 ECH