Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01011 ATGTTGAAAGTGAAGGAAGGGACGAGACCACCATGGGTGGGACTTGGAGCTGCTGCGTGGGTTCAAATTGCTGTTGGAAATGCTTACACTTTCCCACTTTACTCTCCCGCCTTCAAATCCGTTCTAGGTTTCAACCAGCGTCAGCTTACTCTCCTTGGTGTCGCTAATGATATTGGTGAGAATGTTGGTCTTCTTCCTGGTATTGCCTCCAACAAGCTCCCTCCTTGGCTTATTCTCTTCATTGGTGCTCTTCTCTGTTTCCTTGGTTTTGGTGTTCTCTGGCTCGCTATCTCTCAAACAATCCCTCCCCCTCCTTACTTCGTGCTATGGATTGCACTTGTTATTGCTGCCAACAGTTGTGCATGGTTAACCACTTCTATTCTTGTAACCAACATGAGAAATTTCCCTGCCAGTAGAGGCACAGTTGCAGGGATCCTGAAAGGTTATGGAGGGATAAGTGCTGCAGTTTTTACTGAAGTTTTTAGGGCAGTTCTTAATAATTCTCCTTCCAATTTCCTCTTGTTCCTTACCCTTGGTATTCCTGCTTTATGCTTCAGTGTCATGTTTTTAGTTCGTCCTTGTACTCCTGCTTCTGGTGATAATCCTGCAGAAAAGGGGTATTTTCTTTTTATCCAAGTTTCAAGTGTGGTCTTGGGTGTTTATTTGCTTGTAACAACGACACTTGATTACATTCTCCCCATAAATCAGATAGTATCATACATTTTGGTGGTTGTGATGGTTCTCCTTCTCATGGCTCCACTTGCTATCCCTTTAAAGATGACACTTTATCCCAGAAAAGCCACTGAAGCAGAAACACCTGAGCAAAAAGTTGGATCTTCAGACTGGCAGATTCAAGAAGGCAAAGAAGACAACACAACACCCCTGTTAACATCTTCATCAACCAGTGCCCTTGATCCAGATGGTTCATCTGAGGTGAGTAGGCTTCTTGCTGAGGGTGAGGGAGCTGTAGTACCAACAAAGAAGAGAAGGCCCAGACGAGGGGAAGATTTTAAATTTACTGAGGCTCTAGTAAAGGCTGATTTTTGGCTATTATTTTTTGTATACTTTGTTGGTGTTGGAACTGGTGTTACTGTTGTTAATAATCTGGCTCAAGTAGGAAATGCACAAGGTGTGGAAGATACATCTATCTTACTGTCAGTTTTCAGCTTTTTCAATTTTGTGGGTCGGCTTGGTGGGGGAATGGTTTCAGAACACTTTGTCAGGACCAAAACGATTCCACGGACAATTTGGATGACATTCACCCAGATAGTTATGATCATCTTGTACCTTTTGTTTGCCTATGCTGTCAATGGAACCCTTTATCCTGCAATTGCAATTCTTGGTATCTGCTATGGCGTGCAATTTTCCATATTGATTCCTACTGTCTCAGAGCTTTTTGGGTTGCAGCACTTTGGTTTATTTTTCAACTTCATGTGTTTGGTTAACCCACTTGGAGCACTCCTTTTCTCAGCTCTTCTAGCAGGGACTATTTATGATAATGAGACAGCAAAGCAGCATGGTCTAGGCCTCATTGGTTCAAGTCTTACCTGCTTGGGTCCAAATTGTTTTAAGGTCACCTTTTTGGTTCTGGCTGGTGTGTCTGCTGCGGGTAGCATCACGAGCATAATCTTGACTATAAGAATTAAGCCTGTTTACCAAATGCTTTATTCTGGGGGTTCTTTCAGGCTACCTCAAGCATCAGTTCACTAA 1710 0.4298 MLKVKEGTRPPWVGLGAAAWVQIAVGNAYTFPLYSPAFKSVLGFNQRQLTLLGVANDIGENVGLLPGIASNKLPPWLILFIGALLCFLGFGVLWLAISQTIPPPPYFVLWIALVIAANSCAWLTTSILVTNMRNFPASRGTVAGILKGYGGISAAVFTEVFRAVLNNSPSNFLLFLTLGIPALCFSVMFLVRPCTPASGDNPAEKGYFLFIQVSSVVLGVYLLVTTTLDYILPINQIVSYILVVVMVLLLMAPLAIPLKMTLYPRKATEAETPEQKVGSSDWQIQEGKEDNTTPLLTSSSTSALDPDGSSEVSRLLAEGEGAVVPTKKRRPRRGEDFKFTEALVKADFWLLFFVYFVGVGTGVTVVNNLAQVGNAQGVEDTSILLSVFSFFNFVGRLGGGMVSEHFVRTKTIPRTIWMTFTQIVMIILYLLFAYAVNGTLYPAIAILGICYGVQFSILIPTVSELFGLQHFGLFFNFMCLVNPLGALLFSALLAGTIYDNETAKQHGLGLIGSSLTCLGPNCFKVTFLVLAGVSAAGSITSIILTIRIKPVYQMLYSGGSFRLPQASVH. 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01011 569 CDD MFS_Mch1p_like 10 537 - -
Seca12g01011 569 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 553 - -
Seca12g01011 569 SUPERFAMILY MFS general substrate transporter 206 550 IPR036259 -
Seca12g01011 569 MobiDBLite consensus disorder prediction 289 309 - -
Seca12g01011 569 SUPERFAMILY MFS general substrate transporter 11 195 IPR036259 -
Seca12g01011 569 Gene3D MFS general substrate transporter like domains 344 552 IPR036259 -
Seca12g01011 569 Gene3D MFS general substrate transporter like domains 12 200 IPR036259 -
Seca12g01011 569 MobiDBLite consensus disorder prediction 289 308 - -
Seca12g01011 569 Pfam Nodulin-like 11 258 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01011 Seca-Chr12 9687619 9690235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g01011 2 569 Nodulin-like Gene Family AT1G80530 57.666 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01011 - - gmx:100787328 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01011 12 9687619 9690235 Seca12g01011 12 9687619 9690235 ECH