Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g01007 ATGATCATGGGATACCAAAAGCCTGCATGGTTGGAAGCTCTTTACACACAAAAGTTCTTTGTGGGGTGCTCTTACCATGAGAATGCAAAAAAGAATGAGAAGAATGTGTGCTGCTTAGATTGTTGCACCAGTATTTGTCCTCACTGTTTGCCTTCTCATCGCTTCCATAGGCTTCTTCAGGTTCGCCGTTATGTTTATCATGATGTTGTCAGATTGGAAGATCTTCAGAAACTCATAGACTGCTCCAATGTTCAGGTAGCCTATACCATCAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACCGCCAATTCAAAGGGTCAGGAAACTACTGCACTTCCTGTGATAGAAGTCTCCAAGAACCTTTCATCCATTGCTCTCTAGGATGCAAGGTGGATTTTGTGCTGAAACACTACAAGGATCTGTCTCCTTACTTGAGGACATGCAACTCCCTACAGCTAAGTCCTGATTTCCTGATTCCACAAGAGATGGGGGATGAAGAGATGACTCGTTCAACTGTAGTGGATTGTGATGAACCAATGAGTTCAAGTTCAGGGTCATCAGGGTCAGAGAACATAAGCATGGCATGCACAGAGATTGTTAGGAAGAGGAGGAGTGGATGGACTGTGTGTGCAAAATTTATGACCAATAGGAATAAGGTTTCAGATGAAGACATGGCTACCAGCATGAGTAGAAGAAAAGGCATCCCTCATAGGTCTCCTCTCTGTTAA 738 0.435 MIMGYQKPAWLEALYTQKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLQKLIDCSNVQVAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPYLRTCNSLQLSPDFLIPQEMGDEEMTRSTVVDCDEPMSSSSGSSGSENISMACTEIVRKRRSGWTVCAKFMTNRNKVSDEDMATSMSRRKGIPHRSPLC. 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g01007 245 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 244 - -
Seca12g01007 245 Pfam PLATZ transcription factor 62 134 IPR006734 -
Seca12g01007 245 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g01007 Seca-Chr12 9611994 9614216 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca12g01007 PLATZ 4.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g01007 - - gmx:100785737 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g01007 12 9611994 9614216 Seca12g01007 12 9611994 9614216 ECH