Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g00966 | ATGGCTTCAAAACTCATTACTTTCTTCCTTCTCTTCCTCCCTCTCAAATCACTCTCTTCTGCATATACCCCGTCATGGGTGAAAGCTGGTTATTACTATTCTGGCAGTGAAATTTCTGCTTCAGACATAAAAGCCACGCTTTTCAATCACCTCTTTTGCGCTTTTGCTTATATAAACTCCACCAACTACAACATCTTTATCAACTCTTCGGAGGAACACAAGTTCTCCACCTTCACCGACACTGTAAAGCTCCAAAACCCATCTGTTTCAACGCTTTTATCCATCTGGGGTGGCAGAGACGACCCTTCAGTGTTCAACTCAATGCTAAACCAATCTTCTCATAGAAAATCTTTCATTGATTCTTCAATCAGTTCAGTAAGGCAATATGGGTTTCAGGGCATAGACCTATATGCAGTCAAGCCAAGGCAGGGTAAGGACCTTATTGCCAATTTTGGAACCCTTTTGAAGGAGTGGAGAGCTGCAATAACTTCTGAGGCAAGAAACTCTAACAAGCCAGAGTTAGCATTGGTGATGGCAGGTTACTTCCTCAAAGCTTCAGACTCCTTCAGTTACCCCTTCGAATCAATGCAGATGAACTTGGATTGGGTACATCTTGTGTCATATAATTACTATCTTCCTAAAAAGGACAATGTCACTGGTTTTCATGCTGCTTTATATGGTCCATCTGGTTGGGATAATACTGATTCTAGTATCAAAGAGTGGAGGAGAAGGGGATTTTCATCTAGCAAGCTTGTAATTGGCTTGCTTTATCATGGATATGCATGGAAACTTGTGAACCCAGGAGACAATGGCGTGGGAAAACCAACATCAGGACCTGCCATTACAAAGGACGGTTCCATGGCTTATAAGCTGATAAAGAGTTACATCAGAAGCTTTGGAGGGGGTGTTGTTTCACATTATAATGCTACTTTTGTGGTGAATCACTTCACAGTTGCATCCACCACTTGGGTTAATTTTGATGATGTGGAGGTAATCAGGGCTAAAGTTTCTTATGCAAAGAAAAATGGCCTACTTGGTTACAGCATGTTCCAATTGAGTAATGATGAAAATTGGGTCCTTTCAAGGGCAGCTCAAGAAGTAGATGAAGATCATCATAAGAGGAGGTTGCTGATAATTGTTCTGCTTACTACTCTGACTTTTGCACTACTATTGGGAATATTATTTTGCTACTACCACCGAGGAACTGTGGCCACTATTACAAGAATATTGTATAAACTAAGGAGATATTTATCAGCAGCTGAAGAAAAAGATCTTGATGGAAATCATTCTGATCTGATAGCATTCAGTTATCTCACAATTAAAGTGGCAACAGATAACTTCTCAAAAGATAATAAGCTTGGAGAGGGGGGATTTGGCACAGTATACAAGGGCAAATTACGGAAGGGACAGGAAATAGCTGTGAAAAGACTCTCAGAAACTTCAAATCAAGGCCTTGAAGAGTTCAAAAATGAGATCACACTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAAGGATGAGAAGATTCTGATCTATGAATACCTGCCAAACAAAAGCTTAGATCATTTCCTTTTTGATCCAAGGAAATCAATTCTTTTAGACTGGAGCAAGCGTGTCAATATCATTGAAGGGGTTACTCAAGGCCTTGTTTATCTCCAAGAGTATTCAAATTTTACTATAGTCCACCGAGATCTTAAAGCTAGTAATGTTTTGTTAGATCATGAGATGAATCCCAAGATATCAGATTTTGGCATGGCTAGAATTTTCAGGAAATATGACCTTGAAGCAAACACAAACAGGATCGTGGGAACATATGGGTATGTACCTCCTGAGTATGTGAGGAAAGGCATATACTCAACCAAGTACGATGTTTATAGTTTTGGAGTTCTTCTCTTGCAAATCATAAGTGGAAAAAGGACTTCATGTTATTACGGTACACATGAAAATATGAACCTTTTGGAATATGCATATGAGCTGTGGATGGAAGGCAGAGGTGAAGAGTTTATTGATCCATCATTGGATGATACAACATCACCTTGTAAAATCATGAGATGCATGCAGGTGGGTCTGTTGTGCGTTCAAGATAACTCTGCAGATAGACCTTCCATGTTAGAAGTTGATTCACTGCTGAAGAATGAAGCTGCACCTATTGGTACTCCCAAAATGCCCGCTTTTTCAATTAAAAAACATGAAGATGAGGAAGAAAGAGCCCACTATGGGATCAAATTTTCTTCAAACAATGATGTTACAATTTCTGAACTGGCACCAAGATGA | 2298 | 0.3951 | MASKLITFFLLFLPLKSLSSAYTPSWVKAGYYYSGSEISASDIKATLFNHLFCAFAYINSTNYNIFINSSEEHKFSTFTDTVKLQNPSVSTLLSIWGGRDDPSVFNSMLNQSSHRKSFIDSSISSVRQYGFQGIDLYAVKPRQGKDLIANFGTLLKEWRAAITSEARNSNKPELALVMAGYFLKASDSFSYPFESMQMNLDWVHLVSYNYYLPKKDNVTGFHAALYGPSGWDNTDSSIKEWRRRGFSSSKLVIGLLYHGYAWKLVNPGDNGVGKPTSGPAITKDGSMAYKLIKSYIRSFGGGVVSHYNATFVVNHFTVASTTWVNFDDVEVIRAKVSYAKKNGLLGYSMFQLSNDENWVLSRAAQEVDEDHHKRRLLIIVLLTTLTFALLLGILFCYYHRGTVATITRILYKLRRYLSAAEEKDLDGNHSDLIAFSYLTIKVATDNFSKDNKLGEGGFGTVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEITLTARLQHVNLVRLLGYCTKKDEKILIYEYLPNKSLDHFLFDPRKSILLDWSKRVNIIEGVTQGLVYLQEYSNFTIVHRDLKASNVLLDHEMNPKISDFGMARIFRKYDLEANTNRIVGTYGYVPPEYVRKGIYSTKYDVYSFGVLLLQIISGKRTSCYYGTHENMNLLEYAYELWMEGRGEEFIDPSLDDTTSPCKIMRCMQVGLLCVQDNSADRPSMLEVDSLLKNEAAPIGTPKMPAFSIKKHEDEEERAHYGIKFSSNNDVTISELAPR. | 766 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g00966 | 765 | Gene3D | Transferase(Phosphotransferase) domain 1 | 523 | 725 | - | - | |
Seca12g00966 | 765 | Gene3D | Phosphorylase Kinase; domain 1 | 410 | 522 | - | - | |
Seca12g00966 | 765 | FunFam | Uncharacterized protein | 523 | 727 | - | - | |
Seca12g00966 | 765 | FunFam | Uncharacterized protein | 422 | 522 | - | - | |
Seca12g00966 | 765 | SUPERFAMILY | Protein kinase-like (PK-like) | 430 | 736 | IPR011009 | - | |
Seca12g00966 | 765 | SUPERFAMILY | Chitinase insertion domain | 259 | 326 | IPR029070 | - | |
Seca12g00966 | 765 | ProSitePatterns | Protein kinases ATP-binding region signature. | 453 | 475 | IPR017441 | GO:0005524 | |
Seca12g00966 | 765 | Gene3D | - | 257 | 326 | IPR029070 | - | |
Seca12g00966 | 765 | Pfam | Glycosyl hydrolases family 18 | 31 | 355 | IPR001223 | GO:0005975 | |
Seca12g00966 | 765 | SMART | 2g34 | 26 | 355 | IPR011583 | GO:0008061 | |
Seca12g00966 | 765 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 317 | 762 | - | - | |
Seca12g00966 | 765 | SMART | serkin_6 | 447 | 723 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g00966 | 765 | ProSiteProfiles | Glycosyl hydrolases family 18 (GH18) domain profile. | 26 | 371 | IPR001223 | GO:0005975 | |
Seca12g00966 | 765 | Gene3D | Glycosidases | 41 | 356 | - | - | |
Seca12g00966 | 765 | ProSiteProfiles | Protein kinase domain profile. | 447 | 718 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g00966 | 765 | Pfam | Protein kinase domain | 448 | 650 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g00966 | 765 | CDD | STKc_IRAK | 453 | 720 | - | - | |
Seca12g00966 | 765 | SUPERFAMILY | (Trans)glycosidases | 26 | 367 | IPR017853 | - | |
Seca12g00966 | 765 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 568 | 580 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g00966 | Seca-Chr12 | 9274629 | 9278468 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g00966 | 433 | 765 | Receptor kinase-like Gene Family | AT4G11530 | 50.442 | 5.64e-114 | 358 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca12g00966 | Glyco_hydro_18 | 5.4e-56 | CL0058 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g00966 | - | - | aprc:113847882 | 1235.71 |