Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00923 ATGCCGAGCCGTTGTGAAATATGCTGTGAGTTGATGATCGCCGTCTTGCTCCCTCCTTTAGGAGTTTGCTTCCGCCATGGTTGCTGCAGTGTAGTTGAATTCATCATCTGCGTGCTTCTCACTATACTAGGGTATATCCCTGGTATAATTTATGCTCTGTATGCCATTATCTTTGTTGATCGTGATCAGTTCTTTGATGAATATAGGCGTCCTCTGTATGCACAACAGTACTAA 234 0.4359 MPSRCEICCELMIAVLLPPLGVCFRHGCCSVVEFIICVLLTILGYIPGIIYALYAIIFVDRDQFFDEYRRPLYAQQY. 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00923 77 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 60 IPR000612 GO:0016020
Seca12g00923 77 Pfam Proteolipid membrane potential modulator 9 56 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00923 Seca-Chr12 8849145 8851038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00923 1 76 RCI2 Gene Family AT4G28088 73.684 1.08e-38 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00923 - - gmx:100306426 149.828