Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g00919 | ATGCATCAAGGTGATCAAACGGTTCTGAGCTTGAGGCCTGGTGGTGGTCGAGGAAGCAGACTCCACGCTCCTAGATTCGATTCCTCTTCATCTGCCTCTTCTGCTTCCCCTGCTTTCGGTGATCTTCCTCTCTTGCGTTCCCATGGCGCCGCTCCTTCTCCTTTCTCTATCAAGGCTGGAGATTCGCGTTTTGAAGGTCGTGAGCGTGTGCGCTATACCAGAGATCAGCTTTTACAGCTTAGAGAGGCTGTTGAGGCCCTTGATGATATTTTAAAGATCAAACAAGATATTGAAGCTGAACTTCTTGGTGAAGATCAAAGTTGGGGCCGCTCAGAAAACAATTCCCCACCTCAATTTCAAAATCGATATTCCGAGCCAGATAACCGGGACTGGCGTGGTCGATCTGGGCAACTTCCTGCTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGAGAATTTGGCAATACTGGTCAGGGCAATCGTCAAGACCAACTGAATTCTCAGTTTGCAAGAGCACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCGACGCTAGTCAAGGCTGAGGTACCATGGTCAGCTAAAAGGGGAAGTCTCTCTGAAAAGGACCGTGTCTTGAAGACTGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATATCCTGAAGGGTCAGTTGATCGATGCTGGCATTACATCCGCTGACATACTGAAGGGAGTTATTTCACTGATATTTGATAAGGCAGTGTTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTTTGATCTTAGTGAAAAGCTGCCCCCTTTCCCATCTGAAGAGCCTGATGGGAAAGAAATAACTTTTAAGCGAGTACTCTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAAATAAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGACGTGACAAGGACAGACTTGTCAAGCTTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTCCAGGAGCTTTTAGGGCCTCCTGACAGCAAGGTATGTCCAGCTGAGGAAAATGTTGAAGCTATATGTCAATTTTTCAACACTATTGGTAAGCAGCTCGATGAAAGCCCAAAATCACGGCGTATAAATGATATGTACTTTAGCCGGTTGAAAGAATTGAGCACAAATCCCCAACTTGCACCACGGCTGAGGTTCATGGTTCGTGATGTTTTAGATTTGCGTGCTAATAACTGGGTTCCAAGACGTGAAGAGGTAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATCAGAAATACCCGTGTAGTTTCTGGTGCTCAAGGAAATACGGGCCCCGGGGGCTTCCCCATTGCCCGACCTGGTACAGGAGGTTTAATGCCTGGGATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAGATGCCTAGGACTAGATCGATGCCAAGAGGAGACATGTCAGGCACACAAACCGGAGGACGTGGTCAGCCTCCTTTCCTTTCCAAGTCATCAGCGCTGAACTCGAAGTTACTACCTCAAGGTAGTGGTGGTCTTATAAGTGGGAAAAGTAGCGCCCTAGTGCATGGAGGTGGTGCTCCTCCTGCTCGTCCATCAAACTTTGGTTTAGGTACTGAGCCTGCACCTCAAAACCCTTCACCTGTTAAACCTGTTCCTACTGTATCCTCTGAGAAGCCACAGGCTCCAGCTACAAAATTGAATACTGCTGATCTTCAGCGCAAAACTATTTCTCTCTTGGAAGAATATTTCAATGTTCGGCTGTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAATCTCCAGCTTATCACCCTGAGGTTGTCAAGGAAGCCATTTCCCTTGCGCTAGATAAAAGTCCACCATGTGTTGAACCGGTTGCCAATCTTCTTGAGTATCTGTTTATTAAAAAGATCCTCTCAGCTAGAGACATAGGGACTGGATGTTTGTTGTTTGGTTCTCTGCTGGATGATATTGGCATAGATTTGCCTAAATCACCAAATAATTTTGGTGAGATAGTAGGGAAACTAATTTTGGCTGGGGGTTTGGATTTTAAGGTGGTGAGAGAGATCCTTAAGAAGGTTGAGGATGACCGGTTCCAGAAAACAGTATTTGACTCAGCAGTGCAGGTAATTACATCTGCATCCGGCCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGCCGGAGTGTGCTCAAGTGA | 2364 | 0.4619 | MHQGDQTVLSLRPGGGRGSRLHAPRFDSSSSASSASPAFGDLPLLRSHGAAPSPFSIKAGDSRFEGRERVRYTRDQLLQLREAVEALDDILKIKQDIEAELLGEDQSWGRSENNSPPQFQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFGNTGQGNRQDQLNSQFARAQISSNQGGGPTPTLVKAEVPWSAKRGSLSEKDRVLKTVKGILNKLTPEKFDILKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYAQLCFDLSEKLPPFPSEEPDGKEITFKRVLLNNCQEAFEGADKLREEIRQMTAPEQEMERRDKDRLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNTRVVSGAQGNTGPGGFPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEMPRTRSMPRGDMSGTQTGGRGQPPFLSKSSALNSKLLPQGSGGLISGKSSALVHGGGAPPARPSNFGLGTEPAPQNPSPVKPVPTVSSEKPQAPATKLNTADLQRKTISLLEEYFNVRLLDEALQCVEELKSPAYHPEVVKEAISLALDKSPPCVEPVANLLEYLFIKKILSARDIGTGCLLFGSLLDDIGIDLPKSPNNFGEIVGKLILAGGLDFKVVREILKKVEDDRFQKTVFDSAVQVITSASGQAVLDSQASDIEACRSVLK. | 788 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g00919 | 787 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Seca12g00919 | 787 | ProSiteProfiles | MI domain profile. | 622 | 744 | IPR003891 | - | |
Seca12g00919 | 787 | Pfam | MA3 domain | 623 | 735 | IPR003891 | - | |
Seca12g00919 | 787 | SUPERFAMILY | ARM repeat | 203 | 439 | IPR016024 | - | |
Seca12g00919 | 787 | Gene3D | - | 201 | 437 | - | - | |
Seca12g00919 | 787 | Coils | Coil | 80 | 100 | - | - | |
Seca12g00919 | 787 | MobiDBLite | consensus disorder prediction | 529 | 566 | - | - | |
Seca12g00919 | 787 | MobiDBLite | consensus disorder prediction | 107 | 124 | - | - | |
Seca12g00919 | 787 | SUPERFAMILY | ARM repeat | 618 | 767 | IPR016024 | - | |
Seca12g00919 | 787 | SMART | if4_15 | 210 | 436 | IPR003890 | GO:0003723|GO:0005515 | |
Seca12g00919 | 787 | Pfam | MIF4G domain | 210 | 436 | IPR003890 | GO:0003723|GO:0005515 | |
Seca12g00919 | 787 | Gene3D | - | 616 | 781 | - | - | |
Seca12g00919 | 787 | MobiDBLite | consensus disorder prediction | 506 | 616 | - | - | |
Seca12g00919 | 787 | MobiDBLite | consensus disorder prediction | 105 | 147 | - | - | |
Seca12g00919 | 787 | MobiDBLite | consensus disorder prediction | 602 | 616 | - | - | |
Seca12g00919 | 787 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 201 | 437 | - | - | |
Seca12g00919 | 787 | FunFam | Eukaryotic translation initiation factor isoform 4G-2 | 616 | 777 | - | - | |
Seca12g00919 | 787 | SMART | ma3_7 | 623 | 735 | IPR003891 | - | |
Seca12g00919 | 787 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA | 51 | 771 | IPR045208 | GO:0003743 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g00919 | Seca-Chr12 | 8827990 | 8833970 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g00919 | 1 | 785 | Eukaryotic Initiation Factors Gene Family | AT5G57870 | 66.076 | 0.0 | 1001 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g00919 | K03260 | - | gmx:100781275 | 1335.47 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca12g00919 | 12 | 8827990 | 8833970 | Seca12g00919 | 12 | 8827990 | 8833970 | ECH |