Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00873 ATGGATGCGCATGCCAAGAAAAAGGCGTTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAGCGCATAGAATCTCCCCTCGTGAGGTATAATGAATTTGATCAGCCTGTTTGCCGGGTTTGTGATGTTGTTTTGAAGTCTGAGTCTATTTGGGACGCACACCAAGTTTCTCGTAAGCATCGAGAGGCAATAAGTAATCTTAAAGCTAATGCAGCTGGATTAAATCAGCATAACAATGCAAAGCCTGACATTCCCAAGGCTAAACCAGAACAGCCTTCAGAGTCACAATCCAAAATACCCCAATGTTCACAAGAAGTGGCTAAACCTCAGTCATCATCGGTGCTTCCACCTAATTTTTTTGATGACAGTGATGCAAGAAAGGCAAGATCTGAAAAGAACTCTTCCCATTTGGTGGACTCAGATTTAGGTAAAAAGGCAGGGGTTTCTGCTCAGACTCAGGTGTTAAACTTGGAGAAAGAGAAAGGTAACTTTCATGGCTATAATACTGCAAAGTCAAAGGTTAGTCAAACAACAATGGAGATTAGGCAGACATCAGTCAAGGCTACAGATACAGAGATCAAGCAAGTAAAAGGGGCTCTGCCTGAAGGCTTTTTTGATAATAAGGAAGCTGATTTGAAGGCTCGTGGTATAAAGCCTGTTAAGCCAGATGTCAAGTAG 681 0.4214 MDAHAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESIWDAHQVSRKHREAISNLKANAAGLNQHNNAKPDIPKAKPEQPSESQSKIPQCSQEVAKPQSSSVLPPNFFDDSDARKARSEKNSSHLVDSDLGKKAGVSAQTQVLNLEKEKGNFHGYNTAKSKVSQTTMEIRQTSVKATDTEIKQVKGALPEGFFDNKEADLKARGIKPVKPDVK. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00873 226 MobiDBLite consensus disorder prediction 123 140 - -
Seca12g00873 226 SUPERFAMILY beta-beta-alpha zinc fingers 31 71 IPR036236 -
Seca12g00873 226 MobiDBLite consensus disorder prediction 73 147 - -
Seca12g00873 226 Pfam Zinc-finger of C2H2 type 39 61 - -
Seca12g00873 226 Gene3D Classic Zinc Finger 32 70 - -
Seca12g00873 226 PANTHER UNCHARACTERIZED 1 226 IPR040050 GO:0003676|GO:0005681|GO:0008270
Seca12g00873 226 MobiDBLite consensus disorder prediction 91 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00873 Seca-Chr12 8323829 8329164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00873 1 226 C2H2 Transcription Factor Family AT3G02860 46.154 6.65e-59 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00873 K13104 - gmx:100808515 347.436