Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00849 ATGGGAAATTTTTGTAGACAAAATATTCCCCAAAGAATAAGGGTTCAACTGGGTCCTGATACAGCTGCTGGTGCTGCAAGAACTGATGCTCTCTTGAATGGTCTAGAGATTTTCAAGCTTAGTCGAAATGGTAATCTTGCCTATGTGGAAAGATATAACTCAGCTGACAATTCAGTAAGCAAATCAAAAGCAAAAATTTGGGTTGGAATTGGAGCAGGTTTAGCTTCTGTAGCTGTAATTGCATGTATAGTTGTTCTTGTTTTCTGTTTCTGCATAAGGAGGAAGAAAGAATCAAGTGATACCAAAAACAACTCTCCGGGTTGGCGACCATTGTTCCTGTATGGAGGGGCTGCTGTAAACAGTACCGTTGGTGCCAAGGGATCAACAGGCACTCAGAAGTTATATGGATCTGTGGCCTTAACCAGAGTTGGCAAGCGGTTTACATTGGCAGAAATTACTGCTGCAACAAATAACTTTGATGACAGTTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTGTATAAGGGGGAGATTGAGGATGGTGTCCCTGCTGCAATTAAGCGTGCCAACCCGCCATCTGAGCAAGGTCTGGCTGAATTTGAAACAGAAATTGAGATGCTCTCCAAACTCAGACATAGGCATCTGGTGTCCTTGATTGGTTTCTGTGAAGAGAAAAATTAA 681 0.4244 MGNFCRQNIPQRIRVQLGPDTAAGAARTDALLNGLEIFKLSRNGNLAYVERYNSADNSVSKSKAKIWVGIGAGLASVAVIACIVVLVFCFCIRRKKESSDTKNNSPGWRPLFLYGGAAVNSTVGAKGSTGTQKLYGSVALTRVGKRFTLAEITAATNNFDDSLVIGVGGFGKVYKGEIEDGVPAAIKRANPPSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKN. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00849 226 ProSitePatterns Protein kinases ATP-binding region signature. 165 187 IPR017441 GO:0005524
Seca12g00849 226 ProSiteProfiles Protein kinase domain profile. 159 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g00849 226 Gene3D Phosphorylase Kinase; domain 1 121 226 - -
Seca12g00849 226 FunFam receptor-like protein kinase FERONIA 123 226 - -
Seca12g00849 226 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 224 - -
Seca12g00849 226 Pfam Protein tyrosine and serine/threonine kinase 164 225 IPR001245 GO:0004672|GO:0006468
Seca12g00849 226 SUPERFAMILY Protein kinase-like (PK-like) 136 226 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00849 Seca-Chr12 7929615 7930809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00849 13 226 Receptor kinase-like Gene Family AT1G30570 59.070 6.06e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Seca12g00849 PK_Tyr_Ser-Thr 3.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00849 - - gmx:100791403 360.533