Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00843 ATGTCTCAGGACCTTGATCTATCTGGCCTTTTCGAAGAACAGGATCACAAAAAACAGAGAACAAGGCTTGGATCGACACACAATATCCTTGAAACAATAGAAAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCAGTAGAGAAAATGAACAACTTTAAGATCAAAATGCAGCCAAAACAGATAATGAAAAGGTCTTCTAGATCATACTTTGATCTATCAGCCCAGGTGATAGAAGTTTCTCCAACTCATTGTGTTGTAGAAATATCAAAATCTACAGGAGATCTAAGAACGTACAACCAATTTTGTGAAAGTCTATCAAGTCTGCTGAAACAAAAATCTCGTATGTCACCACAAAGTCAAGATTCTGTTGATCAGTGCGACGTTGGCATAAAAATGCAAGATGTTGAATGCTATGAAGAGCCAAATAATGAAGATAGTGAGAAGGTCTTCGTTGGCTATAAATCTGCTTGA 474 0.3734 MSQDLDLSGLFEEQDHKKQRTRLGSTHNILETIEKIEAAATDVRLSVEKMNNFKIKMQPKQIMKRSSRSYFDLSAQVIEVSPTHCVVEISKSTGDLRTYNQFCESLSSLLKQKSRMSPQSQDSVDQCDVGIKMQDVECYEEPNNEDSEKVFVGYKSA. 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00843 157 Pfam NAF domain 1 49 IPR004041 GO:0007165
Seca12g00843 157 CDD CIPK_C 1 112 - -
Seca12g00843 157 Gene3D Kinase associated domain 1, KA1 1 113 - -
Seca12g00843 157 FunFam Non-specific serine/threonine protein kinase 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00843 Seca-Chr12 7850451 7852310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00843 1 110 CBL-interacting serine-threonine protein kinases AT5G57630 65.455 5.07e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00843 - - gmx:100786097 228.024