Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00827 ATGTCAAACAAGATGTGGGAGGCTCTCTTAGACCATGCAAAGACATGTGTTCTAGGAGGGAAGCTCTATGTTTATTATCCAGAAGATTCAAGAAATGTTGGTGTTATTTTTAACCACATCTATGAGCTGCGCGGCCTTATAACTGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTAGACTCATTGGTGAAGAAGGCATACGACAATTGGGAACAGGTTGTAGAGTATGATGGCAAATCACTTGTGAACGTGAATCAAAATAATAGTTCTGTTGAGTCTGAAAATGAACTTCCCGTTGAGTCAATTGATTATGGTAGTGGTTTAGATCATCAACTGCAACTGCCAACCCTCCCAGTTTCCGTTCCTTCTGAACAGCAAGTAAATTCAGGGATGCCAGTTGGAGGTTATAACAATAATATGGTAACAAGATACCCAACCCAGTCATTAATCACAAACTCCAGTTCCCGGAGTCAGTTTGATGGCTCATTGTATCTGTCTAATGACCAATTAATAAGCAATGTTCACCAACCCCAAAGCACTAGAAATGATAATGGCACAGTTGGGTTAGCTCTCGGCCCTCCTCAATCATCGACATCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCAGTCTACCTTAAATCCTTTTGATGATTGGTCACACAGCAGGGACAAGGGGGTTGATGAATTCTTTTCAGAAGAAGAAATCCGCCTCAGAAGTCATGAGATGCTAGAGAATGAAGACATGCAGCACTTGCTTCGCCTCTTCAGCATGGGAGGTCATGCCTCCATGAATGCTGAGGATGGCTATTCATACCCATCATTCATGCAATCTCCGATGCCAAACTTCGATGAGGATCGCTCTCGCCCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAGGCGGGCACAGATAGAGGAGTTAGATGAATAG 1002 0.4401 MSNKMWEALLDHAKTCVLGGKLYVYYPEDSRNVGVIFNHIYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYDNWEQVVEYDGKSLVNVNQNNSSVESENELPVESIDYGSGLDHQLQLPTLPVSVPSEQQVNSGMPVGGYNNNMVTRYPTQSLITNSSSRSQFDGSLYLSNDQLISNVHQPQSTRNDNGTVGLALGPPQSSTSGFHAGSSSIQQSTLNPFDDWSHSRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHASMNAEDGYSYPSFMQSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAERRAQIEELDE. 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00827 333 Pfam Calmodulin binding protein C-terminal domain 21 83 IPR046829 -
Seca12g00827 333 PANTHER OS02G0177800 PROTEIN 1 256 IPR012416 GO:0005516
Seca12g00827 333 MobiDBLite consensus disorder prediction 183 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00827 Seca-Chr12 7719539 7721990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00827 1 328 Calmodulin-binding Proteins AT5G57580 57.522 1.33e-129 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00827 - - cam:101488801 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00827 12 7719539 7721990 Seca12g00827 12 7719539 7721990 ECH