Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00818 ATGGAACCAACACACCTTCATCGTGACTTCATTTTCCGTTCCAAACTCCCCAACATTTACATCCCAACGCACCTCCCACTCCACACTTACTGCTTCCAAAACCTTTCCCAATTCAAAGACCGTCCATGCCTCATCAACGCCAACACCGCCGAGACCTTCACCTACGCTGACGTGGAACTCACCGCCCGCAAAGTCGCCGCCGGACTCAACAACCTCGGCATCCAACAAGGCGACGTCATCCTCCTCCTCCTCCAGAATTGCCCCCAATTCGTCTTCGCATTCCTCGGCGCCTCCTACCGCGGCGCCACCGTCACCACCGCCAACCCGTTCTACACTCCGGCGGAGGTGGCAAAACAGGCCACTGCCTCAAACGCAAAGCTCATCATAACTCAATCCTCATACATTGACAAAGTGAAGGATTTCGCCAGAGAAAATGACATCAAAGTGATATGCATTGACTCACCGCCGGAAGGTTTTTTACATTTCTCGGAGTTAACGGAGGCTGACGAGGCTGACATTCCCGCCGTGAAAATTTCCCCAGACGACGTCGTTGCGTTACCGTATTCGTCTGGCACAACGGGGCTTCCGAAAGGGGTTATGTTAACACACAAAGGATTGGTTACTAGCGTGGCGCAACAGGTTGATGGGGAGAATCCGAACCTTTATTTTCACAGCAAGGATGTGTTGCTGTGCGTGCTGCCTCTCTTCCATATTTATTCGCTTAACTCTGTTTTGCTTTGTGGTCTTCGAGTTGGCGCTGCCATTCTCATCATGCAGAAATTTGAGATCGTTGCGCTGTTGGGGTCTGTGCAAAAACACAAGGTGAGCATTGCGCCGTTTGTGCCACCCATCGTTTTGGCGATTGCTAAGAGCCCTGAGGTGGAGCGATACGACTTGTCGTCTATTCGGATGATTATGTCTGGTGCGGCGCCCATGGGAAAGGAACTTGAGGATGCTGTCAGAGCCAAGCTTCCCGACGCCACGTTCGGTCAGGGTTACGGAATGACAGAGGCAGGACCAGTGCTTTCAATGTGCTTAGCGTTTGCAAAGGAGCCAGTGGAGGTGAAATCAGGTGCATGTGGGACAGTTGTAAGAAACGCAGATATGAAGATCGTTGACCCTGAGACGGGGGCTTCGCTTCCAAGGAATCAAGCTGGTGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGTATCTCTTGTCTCTTTGTTTGGACAGGTTACCTAAATGACACAGAGGCGACAGAAAGAACTATAGACAAAGAGGGATGGTTGCATACAGGTGATATTGGTTATATTGATGATGATGATGAGCTTTTCATCGTTGATCGGTTGAAGGAGCTGATCAAATATAAAGGGTTCCAAGTGGCTCCAGCTGAGCTCGAAGCCATGCTGATTGCTCACCCAAACATTTCCGATGCTGCTGTTGTACCCATGCAAGATGAGGCTGCAGGAGAAGTTCCGGTTGCATTTGTTGTACGATCAAACGGTTCTAAAATCTCAGAGGATGAAATCAAGCTATATATCTCAAAACAGGTTGTATTTTACAAGAGAATCAATAAGGTTTTCTTTGTGGGCTCAATTCCAAAGGCACCCTCAGGCAAGATTTTGCGAAAAGACCTCAGGGCAAGGCTCGCGGCCGGTCTCGTCATTTAG 1656 0.4964 MEPTHLHRDFIFRSKLPNIYIPTHLPLHTYCFQNLSQFKDRPCLINANTAETFTYADVELTARKVAAGLNNLGIQQGDVILLLLQNCPQFVFAFLGASYRGATVTTANPFYTPAEVAKQATASNAKLIITQSSYIDKVKDFARENDIKVICIDSPPEGFLHFSELTEADEADIPAVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSKDVLLCVLPLFHIYSLNSVLLCGLRVGAAILIMQKFEIVALLGSVQKHKVSIAPFVPPIVLAIAKSPEVERYDLSSIRMIMSGAAPMGKELEDAVRAKLPDATFGQGYGMTEAGPVLSMCLAFAKEPVEVKSGACGTVVRNADMKIVDPETGASLPRNQAGEICIRGNQIMKGISCLFVWTGYLNDTEATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAMLIAHPNISDAAVVPMQDEAAGEVPVAFVVRSNGSKISEDEIKLYISKQVVFYKRINKVFFVGSIPKAPSGKILRKDLRARLAAGLVI. 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00818 551 CDD 4CL 21 541 - -
Seca12g00818 551 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Seca12g00818 551 FunFam 4-coumarate--CoA ligase 2 447 548 - -
Seca12g00818 551 Gene3D - 446 547 IPR045851 -
Seca12g00818 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 543 - -
Seca12g00818 551 Pfam AMP-binding enzyme 33 451 IPR000873 -
Seca12g00818 551 Gene3D - 4 445 IPR042099 -
Seca12g00818 551 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Seca12g00818 551 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 446 - -
Seca12g00818 551 SUPERFAMILY Acetyl-CoA synthetase-like 7 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00818 Seca-Chr12 7600032 7606629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00818 7 513 Monolignol Biosynthesis Gene Families AT1G51680 69.574 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00818 K01904 - gmx:100779668 937.562