Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00793 ATGTATGTGCGGCTACATGGACACTTGAGAAGTCTTCAGGGTAAAAGGACCTTAAATGTTTTCTCTTTTAGGCCTGTGACTGACTTCAATGAGGTTGCCACCCATTTCATTGACTGCATATATGTTCATCTCTATAATTCCAGGTTACGGCATATTCAAGCTAGTGCTCCTATTCAGCAACATGTTGCTAATTCTGCACCAATTACTCCCACAAAAGGTTATCAAGCTCAAGCTGTCCCACCAAATCAATTTTCTGGTCAACATAACAACGGTCAGAAGAGTGTTGAACTTATGATCTTAGATATTTTACATCTCCCCACAAACAGGTCAAGGGATGAGGGAGTCCATCGTGATCTTATTGCACAGCATCTTGGAATTCCTTTGGATAAGCTCATGCTGGCTATTAAAAATCTTATTCAGGAAGGCGAGATTTATGAAGCTATAGCTGATCACTATAAGTCAATCGTCAATGGTTGA 477 0.4025 MYVRLHGHLRSLQGKRTLNVFSFRPVTDFNEVATHFIDCIYVHLYNSRLRHIQASAPIQQHVANSAPITPTKGYQAQAVPPNQFSGQHNNGQKSVELMILDILHLPTNRSRDEGVHRDLIAQHLGIPLDKLMLAIKNLIQEGEIYEAIADHYKSIVNG. 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00793 158 Gene3D - 87 156 IPR036388 -
Seca12g00793 158 SUPERFAMILY Nucleic acid-binding proteins 1 47 IPR012340 -
Seca12g00793 158 Pfam Replication protein A C terminal 43 150 IPR014892 -
Seca12g00793 158 SUPERFAMILY "Winged helix" DNA-binding domain 92 155 IPR036390 -
Seca12g00793 158 PANTHER REPLICATION PROTEIN A-RELATED 1 155 IPR040260 -
Seca12g00793 158 Gene3D - 1 49 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00793 Seca-Chr12 7351339 7357788 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00793 1 106 Core DNA Replication Machinery Family AT3G02920 48.624 5.16e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00793 K10739 - gmx:100782819 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00793 12 7351339 7357788 Seca12g00793 12 7351339 7357788 ECH