Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00774 ATGGAGGCTCAACCAGCTAAACGCAGACGTGTTTACTCTTTGGAACCAAACAAAATAGTAATGCAATCCATTTTTGCTAGAAAATATTTGAACTATTTAGTTCCAGCCTTGATGAAGATAAAGGCAAAGAGTTCTAATAGCAGCCATTGTGACATTAAGAATGTTAAGTATGAAGTTGACATGGCAATGGTGTTCTCAGCACAAGGCTTTGCATGGAGTAATGGCCTTAAAGTCAAGCTTGAAAGGGAACATGACAATGTAGCTACAAGCACTACTAGCTTTCTTAAGAATGAGGCTAGTAATGAAGGTTCATCAATCCAAAATGAAGTTGTCACACAGGATTATTTCTCTTCAAACCCTAGCTCAAAGTCTCAATCAGACATTTTGGGGAGCAAGTCTAGTAAAAGTGAAGACAAAAAAGATTTAGCCAGAGAAGGTAATGAAGATGAGGACAAAATGAAGAGCTTGAGAATGTTGATACCTGGAGGAGAAGAGATGTGTGATGAACAAATGGTTGCTGAACTAGAGAGTTACATAAGATGTTTGCAAATGCAGGTGAATGTTCTTCAATGCCTGCTAGCTGAGCCATAA 591 0.3841 MEAQPAKRRRVYSLEPNKIVMQSIFARKYLNYLVPALMKIKAKSSNSSHCDIKNVKYEVDMAMVFSAQGFAWSNGLKVKLEREHDNVATSTTSFLKNEASNEGSSIQNEVVTQDYFSSNPSSKSQSDILGSKSSKSEDKKDLAREGNEDEDKMKSLRMLIPGGEEMCDEQMVAELESYIRCLQMQVNVLQCLLAEP. 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00774 196 MobiDBLite consensus disorder prediction 116 154 - -
Seca12g00774 196 MobiDBLite consensus disorder prediction 132 154 - -
Seca12g00774 196 CDD bHLH_AtIBH1_like 150 193 IPR044549 GO:0006355
Seca12g00774 196 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 21 193 IPR044660 GO:0006355
Seca12g00774 196 MobiDBLite consensus disorder prediction 116 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00774 Seca-Chr12 7126839 7127429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00774 7 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 48.649 1.11e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00774 - - aprc:113852314 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00774 12 7126839 7127429 Seca6g03854 6 106097320 106097949 PCT