Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00765 ATGACAGTAACCTTCAAAGGCTGTTACACTGTGAGGCCTATGGAGCCAACATGGTGCGGTCGCTTACCTTTATCCGAATGGGATCAAATAGGCACCATAACACACGTCAACACTATCTACTTCTACCGCCCCTCACAAAATTGGCTTTCTTCCACCATTGCTTCCACCTTAAAAGACTCCTTAAGCCGAGTCCTAGTGCCGTTTTATACACTAGCTGGTCGTTTACACTGGATAGGCAACGGTCGTTTTGAGCTCGAGTGCAATGCCATGGGTGTTCGTTTCACTGAAGCAGAGTCCTCATTAACATTAGAAGATCTCCATAACTTTTCACCCTCTTCCGATGAGTACCAATACCTTATCCCCAATGTTGAATATACCCTCTCAATTCATGAGTTACCCTTGGTTCTGGTTCAGCTCACGAGGTTCAAATGTGGTGGAATTAGCATTGGCCTCAAAATCTCACACGCGATTGCGGATGGACCAAGTGCCCTGCACTTCATTTCTGAGTGGGCAAGGCTTGCAAGAGGTGAGCCTTTGCAAACGACGCCGTTTCATGATCGGAAAGTGTTGCGTGGTGGAGAGCCTCCACTTGTGCCTCAACCACCATACCACGACAAATGGGAGTTCAATCTCCCTCCCCTGTTGTTGGGAGAAACAGAGGAAATAAGGAAGAAGAAAACCACTTTAGCTATGATCAAATTGAGCAAAAACCAAGTTGAGAAATTGAGAAAGACAGCGAATGAGAGTTGGCATGGACCTAGCAATGGGCGTGGTTACACGCGCTATGAGACTGTGACTGGACATATATGGAGAAGTGCGTGCAAGGCAAGGGGACACAAACAGGACCAACCAACGGTTGTAGGTATTTCTGTTGATTCAAGGTGTCGTATGCAGCCTCCATTGCCAAAAGGGTATTTTGGGAATGCTACTTTTGATGTGGTTGCTACTAGTCTCGCGGGTGATTTGATGTCAAAGCCATTGGGGTATGCGTCGAGTAGGATAAGGGAAGCGATTGAGAAGGCAACGGATGAGTATGCGAGGTCAGGGATTGAGTTCTTTAAGAAGAAGGAAGATTTGACTGTGTTTCAAGATCTTCATGCAAAAATAAGGACTGAGGCAAGGCCTTTCTATGGGAACCCAAATTTGGGGGTGATTAGTTGGTTAACGTTACCGATCTATGGGGTTGATTTTGGGTGGGGGAAGGAGGTTTACATGGGTCCAGGAACACATGACTTAGATGGAGATTCTTTGCTTCTTCCAGGTCCTGATGGGGATGGATCTGTGCTGGTTGCTATTTGTCTGCTAGAGAATCACATGGATGCCTTCAAGAAACATATTTATGAAGACATTATGTAA 1356 0.4602 MTVTFKGCYTVRPMEPTWCGRLPLSEWDQIGTITHVNTIYFYRPSQNWLSSTIASTLKDSLSRVLVPFYTLAGRLHWIGNGRFELECNAMGVRFTEAESSLTLEDLHNFSPSSDEYQYLIPNVEYTLSIHELPLVLVQLTRFKCGGISIGLKISHAIADGPSALHFISEWARLARGEPLQTTPFHDRKVLRGGEPPLVPQPPYHDKWEFNLPPLLLGETEEIRKKKTTLAMIKLSKNQVEKLRKTANESWHGPSNGRGYTRYETVTGHIWRSACKARGHKQDQPTVVGISVDSRCRMQPPLPKGYFGNATFDVVATSLAGDLMSKPLGYASSRIREAIEKATDEYARSGIEFFKKKEDLTVFQDLHAKIRTEARPFYGNPNLGVISWLTLPIYGVDFGWGKEVYMGPGTHDLDGDSLLLPGPDGDGSVLVAICLLENHMDAFKKHIYEDIM. 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00765 451 Gene3D - 217 449 IPR023213 -
Seca12g00765 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 447 - -
Seca12g00765 451 Gene3D - 1 207 IPR023213 -
Seca12g00765 451 Pfam Transferase family 1 448 - -
Seca12g00765 451 SUPERFAMILY CoA-dependent acyltransferases 52 182 - -
Seca12g00765 451 FunFam Tryptamine hydroxycinnamoyl transferase 216 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00765 Seca-Chr12 7060151 7061506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00765 1 448 Monolignol Biosynthesis Gene Families AT5G48930 38.717 2.85e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00765 K13065 - gmx:100777007 647.891