Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00751 ATGAGATTGGTGGAGTTTGGGAGTGTGTTGATTGTTCTATCTGTTCTTCTGGTTTCTGGGAGTGCGGAGATTTACATAGTAACTGTTGAAGGTGAGCCTATCATAAGTTATGCTGGAGGTATTGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATTGATACCGCAAGTGAATTGGTTGCTTCTTACGCTCGTCATCTTGAAAAAAAACATGATATGCTTCTGGGCATGTTGTTTGAGCAAGGGACATACAAGAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTGCATATTTCCCCAGAACAGGCAGAAACTCTAAGACATGCTCCTGGAGTGAAATCTATTGAGAGGGACTGGAAAGTGAAAAGACTTACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTATGGCCAACAGGAGGTGGCTTTGATCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCAGGGATCTACCCTCACCACCCTAGCTTTTCAACTCATAATACTGAACCATATGAGCCAGTTCCAAGATATAGAGGAAAATGTGAAGCTGATCCTGAAACTAAAAGAAGTTACTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCCCATGCTGCAATAGCTGCTGGGGCATTTAACCCTTCCATTGATTTTGCATCTCCTCTAGATGGGGATGGACACGGAAGTCATACAGCCTCTATTGCAGCAGGAAACAATGGAATTCCTGTGAGAATGCATGGCCATGAATTTGGGAGAGCAAGTGGGATGGCTCCTCGTGCCAGGATTGCTGTATACAAGGCACTCTATAGACTGTTTGGAGGGTTTGTTGCAGATGTAGTCGCTGCAATTGATCAGGCTGTATACGATGGAGTGGATATACTCAGCCTCTCAGTTGGACCCAACAGTCCTCCAGCAGCCACCAAAACTACATTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGGGTATTTGTTGCACAAGCTGGTGGAAATGGTGGTCCTTTTCCTAAAACAATGGTTTCATACAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATTTGATCCTTGGAAATGGAAAAATCTTAGCTGGTGTTGGGTTATCACCTTCTACACATTTAAACCAAACATACACATTGGTTGCTGCGAATGATGTGCTGCTAGATTCTTCAGTTATGAAGTACAGCCCCACAGATTGCCAGAGACCAGAACTTTTAAACAAGAACTTGATAGAGGGCAATATTCTTCTTTGTGGATATTCTTTCAATTTTGTTGTCGGTACTGCATCAGTCAAGAAAGTATCAGAAACAGCAAAGGCCCTTGGTGCAGTTGGATTTGTTCTCTGTGTCGAAAACATTTCCCCCGGAACAAAATTTGATCCTGTCCCTGTTGGCCTTCCTGGAATTATTATCACAGATGTCAGCAATTCAAAGGAGCTTGTAGATTATTATAATATCTCTACACCAAGAGACTGGACTGGACGGGTGAAGAGTTTCAAAGGTACGGGTAAAATTGGTGATGGTTTGATGCCTATTCTGCATAAATCTGCACCACAGGTGGCATTGTTCTCTGCCAGAGGGCCAAATATAAAGGACTTCAGCTTCCAAGAGGCAGACCTTCTCAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGAGGGATTCGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAGCATCCACATTGGAGCCCTGCTGCCATTAAATCTGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCACTTCTAGCCCAGCAAACTTCTGAAAAAGAAGCTATGGAGCTGGTCAAAGCTACTCCTTTTGATTATGGAAGTGGACATGTTGATCCAAGAGCTGCATTGGACCCTGGGCTCATCTTTGATGCAGGATACCAGGATTATCTAGGCTTCTTATGCACAACACCCGGCATTGATGTTCATGAGATAAAGAACTACACTCATGCACCATGTAACAATTCCATAGGAAAACCATCCAATTTAAACACCCCATCTATCACAATTTCCCATCTTGTGAGAACCCAAGTTGTGACCCGCACTGTCACAAATGTTGCTGAGGAAGAAACCTATGTGATCACAGCCAGAATGGAACCAGCTGTTGCCATTGAAGTCAACCCTCCTGCAATGACTATCAAAGCAGGTGCATCACGTCAGTTTTCTGTGACACTCACAGCTCGCTCAGTGACAGGAAGCTATAGTTTTGGAGAGGTTTTAATGAAAGGAAGCAGAGGGCATAAGGTGACCGAAGGGCAGAAGCAGTCCAAAATATTTTTGACGAAGCCCTTCTCTTTGGATGGTGAATCAAATTTAGATCCCTCTTATAGAGCCCCTAATCTCCTCAATCGCATGTTAAGTTTACTCAAGAATGTACGGCCAGGATCAGATCTCACACACTTCCAGCTGCCGCCTCTGTTTAATTTCCCAAAATCTCAGCTCCAATGCTATGGTGAATCAGTGTACTGCACAGCTTCTAACTTGCTGAGTAAGTGCAACAGTGGCCAGAGTCCACTGGACAGGTTCACATCTGTGGTAGCATGGAGCATATCTACCACACGCCCTACATCTTTTGGGGTTGCTCCTTATAATCCCACTCTTGGAGAGACACACCATGTTTCAAACGGCAACCTTAATGTCCTACTAGAGCAGGTTTCCATCAACCCTCCAGTATCTGCCCTCCATGCAACAGATGAGAAGGAAAACATTGAAATGATGTGGTGCCAGCAACCTGTTCCAAAATTTCGTGGTACATGTATTGAAGCTCAAGTGCATGGTAAACGAGAGTTGAAGCTCCTAAATCATGGGGAAACATATGAGATGAATAGTCCTCACCTTTTAATTAGAATTCTTCCAGTTCCTGGGGTTGATTGGGTTGGCAATGTTAATATAAGGTGCATGGAGACAGGCCTAGTGGCTGAGTTATCCTACAAATCAAGCTATTCTTTTCTAGGACTTGGGGGAAATCGTAAAGTCATCAAAGGGAAGATCCTTGATTCTTCCTCATCCAAAGTTCTTTATGAAGTTGATGGCCATTGGGATAGAACTGTCAAAGTGAAGGATGCAAATAGTGGGAAAGTCACAATGATATATGATGCAAAAGAAGTCATCTCAGGGCTCAAAGCTCCTATTGTCAAGGATGAGGAGAGAGTGTGGCCAACTGAATCAGCCCTTGTGTGGAGTGAGCTGAGCCAAGCCATTGTGAGAAAAGAGTGGGAGAAAGCGAGAGAAGCAAAGCAAAGTGTGGAAGAAAGGCAGAGGAAGATAATTAACGAAAGGGATGCAAAAACGGAATGTTGGATTCCGAAGCATTTTAAGGTCTCTTATGGTAAAGAGTGTGACTGCTCCCCTATTCATAAATGGGTCCCTCCTGCCCCCATCATCATAGCCCAATAA 3567 0.4382 MRLVEFGSVLIVLSVLLVSGSAEIYIVTVEGEPIISYAGGIDGFEATAVESDEKIDTASELVASYARHLEKKHDMLLGMLFEQGTYKKLYSYRHLINGFAVHISPEQAETLRHAPGVKSIERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFSTHNTEPYEPVPRYRGKCEADPETKRSYCNGKIVGAQHFAHAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGNNGIPVRMHGHEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIDQAVYDGVDILSLSVGPNSPPAATKTTFLNPFDATLLGAVKAGVFVAQAGGNGGPFPKTMVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGVGLSPSTHLNQTYTLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIEGNILLCGYSFNFVVGTASVKKVSETAKALGAVGFVLCVENISPGTKFDPVPVGLPGIIITDVSNSKELVDYYNISTPRDWTGRVKSFKGTGKIGDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSEKEAMELVKATPFDYGSGHVDPRAALDPGLIFDAGYQDYLGFLCTTPGIDVHEIKNYTHAPCNNSIGKPSNLNTPSITISHLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVTLTARSVTGSYSFGEVLMKGSRGHKVTEGQKQSKIFLTKPFSLDGESNLDPSYRAPNLLNRMLSLLKNVRPGSDLTHFQLPPLFNFPKSQLQCYGESVYCTASNLLSKCNSGQSPLDRFTSVVAWSISTTRPTSFGVAPYNPTLGETHHVSNGNLNVLLEQVSINPPVSALHATDEKENIEMMWCQQPVPKFRGTCIEAQVHGKRELKLLNHGETYEMNSPHLLIRILPVPGVDWVGNVNIRCMETGLVAELSYKSSYSFLGLGGNRKVIKGKILDSSSSKVLYEVDGHWDRTVKVKDANSGKVTMIYDAKEVISGLKAPIVKDEERVWPTESALVWSELSQAIVRKEWEKAREAKQSVEERQRKIINERDAKTECWIPKHFKVSYGKECDCSPIHKWVPPAPIIIAQ. 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00751 1188 Gene3D - 1109 1176 - -
Seca12g00751 1188 ProSitePatterns Serine proteases, subtilase family, serine active site. 597 607 IPR023828 -
Seca12g00751 1188 FunFam Oxysterol-binding protein-related protein 4B 1109 1179 - -
Seca12g00751 1188 SUPERFAMILY Protease propeptides/inhibitors 86 126 - -
Seca12g00751 1188 SUPERFAMILY Subtilisin-like 129 678 IPR036852 GO:0004252|GO:0006508
Seca12g00751 1188 Gene3D - 691 809 - -
Seca12g00751 1188 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 159 170 IPR023827 -
Seca12g00751 1188 Pfam Oxysterol-binding protein 843 1165 IPR000648 GO:0008289
Seca12g00751 1188 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 128 IPR037045 -
Seca12g00751 1188 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Seca12g00751 1188 PRINTS Subtilisin serine protease family (S8) signature 233 246 IPR015500 -
Seca12g00751 1188 PRINTS Subtilisin serine protease family (S8) signature 596 612 IPR015500 -
Seca12g00751 1188 CDD PA_subtilisin_like 376 514 - -
Seca12g00751 1188 ProSiteProfiles Serine proteases, subtilase domain profile. 123 674 - -
Seca12g00751 1188 CDD Peptidases_S8_3 130 633 IPR034197 -
Seca12g00751 1188 Gene3D Peptidase S8/S53 domain 156 687 IPR036852 GO:0004252|GO:0006508
Seca12g00751 1188 Gene3D - 369 534 - -
Seca12g00751 1188 FunFam Subtilisin-like protease SBT1.5 156 377 - -
Seca12g00751 1188 Pfam Subtilase family 154 638 IPR000209 GO:0006508|GO:0008236
Seca12g00751 1188 Gene3D - 922 1099 - -
Seca12g00751 1188 SUPERFAMILY Oxysterol-binding protein-like 839 1174 IPR037239 -
Seca12g00751 1188 Pfam Fibronectin type-III domain 719 807 IPR041469 -
Seca12g00751 1188 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 83 807 IPR045051 -
Seca12g00751 1188 FunFam Oxysterol-binding protein-related protein 4C 923 1101 - -
Seca12g00751 1188 Pfam Peptidase inhibitor I9 25 127 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00751 Seca-Chr12 6858565 6873034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00751 4 807 Subtilisin-like Serine Gene Family AT4G30020 80.025 0.0 1349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00751 - - gmx:100787619 1502.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00751 12 6858565 6873034 Seca6g03827 6 105780436 105794838 PCT