Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00694 ATGGGGGTGGTTTTGGCTCTGATGCTGCAGCTGGTGAAGCTCTGCATCATTGGCTTTGCTGTTGCAGCCCAAGGATCCAAAGGGTCCATCATATCTCCATCTCCAGTGTTCCTTCCTGTCATTCCTCCAGAAACACTTGCTCTTATCAATCATGGAGAGTTAAGGGGAAGCATTGCACCAAGTTTGCCATCAGATCCAGATGGGCGTGTTATTTCCCCATCTCCAGCAAACTTACATGTGTATTCTTCCCCTATTGAAACACCTGGTTCTTTACACCAAAGAGATTCATGGAGAACCATTTCCCCAAGCTCTCCAGCAGTACCAAATGGGTCAGTCTTTCACCCTCCAAACACATTACCACCTCCTACATCAGCTCCAATTCCTCAGAAGAGTAAAGACATTGAACCATCCATATCTCCAAGTTCAAGCCCTATAGCATTATCACCACCAAATGAAGTTGTTCCTTCACCATCAACAGTGCAAGGGAATATACCACCGTCTGCAAAAGCAAGTCCACCACCTATTGTTAGGCCTCCTTTCTACACACCAACTGCTCCAGCTCCAGTTGCAATACCTTCTGGCAGATCACCAAAAATTTCACCGGTCAGCCAACCAGCGGAACATGCAAATTTGGCACCTAAAGCTGATGATAGGAATGGAAATAAGAGTCACACTGTAGAGCCAATTTCCCCAGCACCAATTGCAACACCTTCAACCAATTTTCCCAAAAATTCATCACAGAGCCAACCAACTGGACATGGAAGTTTTCCTCCCAAAGAGGGAACAAATGAAGCCCCTGCAGCAGTTAATTTGCCAAAAAAATCACCTGTCAGCCAGCCACCTGAGCATGGAAGTCAGCCACCAAATGTCCATCAAAGGAATGCAAATACAGGTCACACCTTGGAGCCCATTTCACCAGTTGCAATACCTCCTGCAACTTCCAAAGAGAATTCAACAGTAAGCCATCCAACTCAACATGGAAGTATTCCACCTAATGTTCATAAAAAGAATACAAATGAAGATCACACCCCTGGGCCAGTTTCACCAGAATCAGTTGCATCCCCACCACGGAAAGCAGAACATATCCCCCCAGTGGCCCACCCTATTTTCCCAACAATAACTCCATCCATATTATCTGCACCAGCCACGTCACCAAGAAGTGCATTTCCGGTAAATCCACCATTGGTCCATCCAATTGTTCCAGCAGTATCTCCATCAAAATTACCAGCATTTGTTCCCTCTCCCATGTCAACTCCTTCAAGAAGCATTGGTTGGAAAAGTGGTGGAGCACCAGTTGCTGCACCTTTGTACAAAACACCAAAGCCACTTCCAGCTGTAATACATTCCCCTGCTCAAGCTCCTGTTGCACAAAAAGCAAGGCAATTGCATCATGCTCCAGAGCCATTGACTTCATCCCCTAAATCTCCTTCTAATAAAGAAAATCATTTTCCTGCATTGTCACCTTCAATCTCATTTTATAAACATCATCATACAAGGAACGTGATTACCAGCCCTGCTCCTGCATCATCATATATGGTTTCTCCTCCCACTTCAAAACACCAAGATAGAGCAATTCCTCCCTCATTGTCACCAGCAAGTGGACAAAAACATCACGTTCCATTACCGATTAACTCAGGTTCTTCAGTTTCCCTATTTTCTTCTCCTATTCATTCAGCCAAAAGCCAAGTTTCACCTGCTCCTTCTTCATCAATCAAATTTGACCCCCACCCTACAAAAACTTTTCCTCCTAAAGTATCTCCATCAGGGTCTTCTGCCATGAGCCCTGAGATGCCCCTCCTACCTCAAGTTCAAGCACTGCCACCCCCACCTCCTAATGAAGATTGTTTATCAACTGTCTGCATAGAGCCTTATGCAACTTCTCCGCCTGGAGTACCTTGCAGATGTGTCTGGCCCATGCGAGTTGGTCTTCGCATTAATGTTCCTCTCTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCTGAAATTGCCACTGGAGTTTTCATGAAGCAAAGTCAAGTTCGAATTATGGGAGCCAATGCAGCAAATCAGCAACCTGAGAAAACTGTTGTCCTTATTGATTTGTTGCCACTTGGGGAAAAGTTTGATAATTCTACAGCCTTTTTGACTTCTGACAGATTTTGGCATAAAAAGGTTGTTATAAAAGCCTCCTACTTTGGAAACTATGATGTTTTATATGTGAGCTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCTTCAAGCATGGGCATGATAGATGGTGGCCCATTTTCCACTGATGACAATAATGGAACGATAATAAAGCCCCTTGGGGTTGACATACAGAAGAGTCAGCATAAAGGTGGACTCAGCAGAGGCATAATTGCCATTATTGCTGTTTCAGTTTTTCTAGCAGTTGTTTTATGTACAGCTGCCGCCTGGGTCATGTTCAAATTCAGAGATCATGTTAGTCAGCCAGCATCAACCCCACGGCTTTCAACACCTTCTCTTACCAAAGCACCAGGTACTGCTCCTGTGTCGTTAATTGGAGATGGAGGAGTTGGATCCATTTCTTCATCATTTCGATCCAGCATTGCTGCTTATACAGGGTCTGCTAAGACTTTCAGTATGAATGACATTGAGAAAGCTACTGATAATTTTCATGCTTCAAGAATACTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGGTATCCTTGGAGAAGGGACAAAAGTGGCGGTCAAGGTTCTAATGAGGGACGATCATCATGGTGATCGTGAATTCTTAGCTGAAGTTGAAATGCTTAATCGTCTTCACCACAGAAATTTGGTCAAGTTGATTGGTATATGCGCAGAGAATAGCTTCCGCTGCTTGGTTTATGAACTTGTTCCAAATGGCAGTGTGGAATTCCATTTACATGGAGTTGACAAGGAAAACTGCAAACTTGATTGGGCTGCTAGGATGAAGATAGCTCTTGGTGCAGCTCGTGGTCTTGCTTATCTGCATGAAGATTCAAGTCCCCGTGTTATACATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTGGCCCGGACAGCAACTGATGAGGAGAATAGACACATATCAACACGTGTCATGGGAACTTTTGGTTATGTGGCTCCGGAGTATGCAATGACTGGGCATCTTCTTGTTAAGAGTGATGTTTACAGCTATGGTGTTGTTCTTCTTGAGCTTTTGACGGGAAGAAAACCTGTAGACATGTCACAAGCTCCTGGTCAAGAGAATCTCGTTGCATGGGCCCGTCCACTTCTCACAAGTAAAGAAGGATTGGAAGCAATATTAGACCCATCTCTAGGAGCTGATGTGCCTTTTGATAGTGTGGCTAAAGTTGCAGCTATTGCTTCAATGTGTGTGCAGCCTGAGGTATCTAACCGTCCTTTCATGGGTGAGGTTGTTCAGGCTTTAAAACTTGTATGCAATGAATGTGAAGAAGCAAAAGAAGATGCAGGTTCAAGAAGTTCTAGCCAGGAGGATTTATCTATTATTTTAGATGAGGGAGTCAGCACTTTTTCTGGACAACTACCAGATAATTTCCAAAGACAATTCTCAGTTACTAACTCTGATTCTGGAGTTGATATTGAAAGAGGCTTGTCAGCATCAGAACTATTCAGTTCATCAGCAAGAATTGGCAGGCCGGAGTCTGGATCGTTTAGAAGAAACTCTTATTCAGGTCCTCTGAGAACCGGAAGAAGCAAGAGGTTTTGGCAGATAATTAGAAGGCTTTCTGGTGGTGACTCGAAGTTGACCCAAAAGAGACGGGGAATATACATAGAGGAAGAGGAGCAAGAGTTAGAGCGAGGGGGTTTACACATTGCAGCAGTTTGGAGTATTGAAGGTGCAAGATCTGCAACTGCTCCAAAACCGATCACGAGTCCAGTCCCCGATTCATGGTACCCCACACTCTCCGTCTTCACGCTCGCCATCGGCCTCGTCTTAACTGCCTCTTTCTTCATTTATGAAGCAACCTCTTCTCGGAAAACCCGTTCCCTTGCTCAGGAGCTGACAACTGGAGCAGTGGCATCAGTCTTCTTGGGTTTTGGGTCCTTGTTCCTCTTACTTGCCAGTGGCGTTTATGTCTAA 4137 0.4445 MGVVLALMLQLVKLCIIGFAVAAQGSKGSIISPSPVFLPVIPPETLALINHGELRGSIAPSLPSDPDGRVISPSPANLHVYSSPIETPGSLHQRDSWRTISPSSPAVPNGSVFHPPNTLPPPTSAPIPQKSKDIEPSISPSSSPIALSPPNEVVPSPSTVQGNIPPSAKASPPPIVRPPFYTPTAPAPVAIPSGRSPKISPVSQPAEHANLAPKADDRNGNKSHTVEPISPAPIATPSTNFPKNSSQSQPTGHGSFPPKEGTNEAPAAVNLPKKSPVSQPPEHGSQPPNVHQRNANTGHTLEPISPVAIPPATSKENSTVSHPTQHGSIPPNVHKKNTNEDHTPGPVSPESVASPPRKAEHIPPVAHPIFPTITPSILSAPATSPRSAFPVNPPLVHPIVPAVSPSKLPAFVPSPMSTPSRSIGWKSGGAPVAAPLYKTPKPLPAVIHSPAQAPVAQKARQLHHAPEPLTSSPKSPSNKENHFPALSPSISFYKHHHTRNVITSPAPASSYMVSPPTSKHQDRAIPPSLSPASGQKHHVPLPINSGSSVSLFSSPIHSAKSQVSPAPSSSIKFDPHPTKTFPPKVSPSGSSAMSPEMPLLPQVQALPPPPPNEDCLSTVCIEPYATSPPGVPCRCVWPMRVGLRINVPLYTFFPLVSELASEIATGVFMKQSQVRIMGANAANQQPEKTVVLIDLLPLGEKFDNSTAFLTSDRFWHKKVVIKASYFGNYDVLYVSYPGLPPSPPLPPSSMGMIDGGPFSTDDNNGTIIKPLGVDIQKSQHKGGLSRGIIAIIAVSVFLAVVLCTAAAWVMFKFRDHVSQPASTPRLSTPSLTKAPGTAPVSLIGDGGVGSISSSFRSSIAAYTGSAKTFSMNDIEKATDNFHASRILGEGGFGRVYSGILGEGTKVAVKVLMRDDHHGDREFLAEVEMLNRLHHRNLVKLIGICAENSFRCLVYELVPNGSVEFHLHGVDKENCKLDWAARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFTPKVSDFGLARTATDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTSKEGLEAILDPSLGADVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECEEAKEDAGSRSSSQEDLSIILDEGVSTFSGQLPDNFQRQFSVTNSDSGVDIERGLSASELFSSSARIGRPESGSFRRNSYSGPLRTGRSKRFWQIIRRLSGGDSKLTQKRRGIYIEEEEQELERGGLHIAAVWSIEGARSATAPKPITSPVPDSWYPTLSVFTLAIGLVLTASFFIYEATSSRKTRSLAQELTTGAVASVFLGFGSLFLLLASGVYV. 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00694 1378 FunFam Receptor-like serine/threonine-protein kinase ALE2 957 1175 - -
Seca12g00694 1378 SUPERFAMILY Protein kinase-like (PK-like) 861 1154 IPR011009 -
Seca12g00694 1378 CDD STKc_IRAK 887 1155 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 232 256 - -
Seca12g00694 1378 Pfam Oligosaccharyltransferase subunit 5 1306 1378 IPR007915 GO:0006487|GO:0034998
Seca12g00694 1378 FunFam receptor-like serine/threonine-protein kinase ALE2 854 956 - -
Seca12g00694 1378 Gene3D Transferase(Phosphotransferase) domain 1 957 1180 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 311 334 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 83 360 - -
Seca12g00694 1378 Gene3D Phosphorylase Kinase; domain 1 853 956 - -
Seca12g00694 1378 Pfam Protein tyrosine and serine/threonine kinase 883 1154 IPR001245 GO:0004672|GO:0006468
Seca12g00694 1378 MobiDBLite consensus disorder prediction 454 486 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 560 594 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 505 537 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 134 166 - -
Seca12g00694 1378 ProSiteProfiles Protein kinase domain profile. 881 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca12g00694 1378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1003 1015 IPR008271 GO:0004672|GO:0006468
Seca12g00694 1378 MobiDBLite consensus disorder prediction 468 485 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 560 575 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 83 111 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 505 524 - -
Seca12g00694 1378 MobiDBLite consensus disorder prediction 284 301 - -
Seca12g00694 1378 ProSitePatterns Protein kinases ATP-binding region signature. 887 909 IPR017441 GO:0005524
Seca12g00694 1378 MobiDBLite consensus disorder prediction 167 186 - -
Seca12g00694 1378 PANTHER OS01G0750732 PROTEIN 607 1180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00694 Seca-Chr12 6340082 6353047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00694 336 1263 Receptor kinase-like Gene Family AT5G56890 55.074 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Seca12g00694 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00694 - - gmx:100816296 1829.68