Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00676 ATGAAGAGGTCATGTAGCTGGAGCCGTTGTCACTTTTGGTTTTGGCTAATGAATATGTTCCTTTTGCATTTGGCAGTAAAGTCCCAACTGACAACAGACTTCTATAAGTCATCATGTCCTAACCTTTCCAGAATAGTAAGGAGAGAGGTTCGAAAAGCTCTAATGAATGAGATGCGAATGGGTGCTTCTCTGCTTCGTCTTCACTTTCATGATTGCTTTGTCAATGGCTGTGATGGATCAATATTACTAGATGGTGGTGATGATGGTGAAAAGTCTGCTCTTCCTAACGTGAACTCTGTTCGGGGATTTGATGTCGTAGATACAATCAAAAGTTCTGTGGAGAGTGAATGCAGTGGGGTTGTTTCCTGTGCTGATATACTAACCATAGCTGCCAGAGATTCTGTTCTTCTGAGTGGTGGTCCTTCATGGAATGTCCCGCTAGGACGAAGAGATGGAACAGTCTCAAACGGAACCTTGGCAAATTCGGCGCTTCCTTCTCCATTTGATTCATTGGATACCATCCTTTCAAAGTTTGCAAATGTAGGCCTCAATCTCACAGACGTTGTTTCTTTATCAGGTGCACATACTATTGGCCGATCAAGGTGTGCCCTGTTTAGCAATAGATTGTTCAACTTCTCAGGAACAGGTTCACCAGACACTACACTAGAAACTACCATGCTCACTGATCTGCAAAATTTGTGTCCTCAAAATGGAGATGGAAATGTAACTGCTGTCCTTGATCGAAACTCATCAGATCTATTTGACAACCACTACTTTAAGAACTTGCTTAGTGGAAAGGGCCTTCTCAGTTCTGACCAGATTCTGTTTTCTAGTGATGAGGCTAATTCAACTACTAAACCTTTAGTCCAAAGCTATAATGACAATAGTTCACTTTACTTCGGAGACTTTGCCAATTCTATGATCAAGATGGGGAATATTAATCCAAAGACAGGGTCTGATGGAGAGATTAGGAAGAACTGCAGAGTGATAAATTCATAG 999 0.4164 MKRSCSWSRCHFWFWLMNMFLLHLAVKSQLTTDFYKSSCPNLSRIVRREVRKALMNEMRMGASLLRLHFHDCFVNGCDGSILLDGGDDGEKSALPNVNSVRGFDVVDTIKSSVESECSGVVSCADILTIAARDSVLLSGGPSWNVPLGRRDGTVSNGTLANSALPSPFDSLDTILSKFANVGLNLTDVVSLSGAHTIGRSRCALFSNRLFNFSGTGSPDTTLETTMLTDLQNLCPQNGDGNVTAVLDRNSSDLFDNHYFKNLLSGKGLLSSDQILFSSDEANSTTKPLVQSYNDNSSLYFGDFANSMIKMGNINPKTGSDGEIRKNCRVINS. 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00676 332 SUPERFAMILY Heme-dependent peroxidases 29 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 Gene3D Peroxidase, domain 2 165 310 - -
Seca12g00676 332 FunFam Peroxidase 165 310 - -
Seca12g00676 332 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 ProSiteProfiles Plant heme peroxidase family profile. 29 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PANTHER PEROXIDASE 72-RELATED 22 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Seca12g00676 332 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 CDD secretory_peroxidase 29 330 IPR033905 GO:0004601|GO:0042744
Seca12g00676 332 FunFam Peroxidase 33 197 - -
Seca12g00676 332 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Seca12g00676 332 Pfam Peroxidase 46 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00676 332 Gene3D - 34 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00676 Seca-Chr12 6119504 6121487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00676 11 331 Peroxidase AT5G19890 62.305 4.98e-148 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00676 K00430 - gmx:100814964 552.362