Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca12g00667 | ATGGTCTGGTTTCAATGCGAAGATTGTGGAGACAACCTCAAAAAGCCCAAGTTGCCGGGTCACTTCCGAACTTGCTCTGCCTACAAGTTGTCATGCATTGATTGTGGGCAAATATTTGGGCGTGACACTGTTCAGGATCATACACAGTGTATTACAGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGCAAAACTTTGAACGCCACAACTGCCAAGCCTAGCAAGGATAGCAAGCCAAGGCCTGAAGTTGATATTAATGTGGGTTTATCTGAACGGCCTCCATGGTTCTGTAGGTATATACTCTATCTGATAACCTTTCTAGTACCATGA | 330 | 0.4485 | MVWFQCEDCGDNLKKPKLPGHFRTCSAYKLSCIDCGQIFGRDTVQDHTQCITEAEKYGPKGQGKTLNATTAKPSKDSKPRPEVDINVGLSERPPWFCRYILYLITFLVP. | 110 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca12g00667 | 109 | MobiDBLite | consensus disorder prediction | 57 | 83 | - | - | |
| Seca12g00667 | 109 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 27 | 51 | - | - | |
| Seca12g00667 | 109 | Pfam | LYAR-type C2HC zinc finger | 30 | 57 | IPR014898 | - | |
| Seca12g00667 | 109 | ProSiteProfiles | Zinc finger C2HC LYAR-type profile. | 1 | 26 | - | - | |
| Seca12g00667 | 109 | SUPERFAMILY | beta-beta-alpha zinc fingers | 30 | 58 | IPR036236 | - | |
| Seca12g00667 | 109 | Gene3D | - | 1 | 50 | - | - | |
| Seca12g00667 | 109 | SUPERFAMILY | beta-beta-alpha zinc fingers | 1 | 26 | IPR036236 | - | |
| Seca12g00667 | 109 | FunFam | cell growth-regulating nucleolar protein-like | 1 | 50 | - | - | |
| Seca12g00667 | 109 | PANTHER | CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR | 1 | 97 | IPR039999 | GO:0003677 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Seca12g00667 | 1 | 97 | C2H2 Transcription Factor Family | AT2G19380 | 51.546 | 6.30e-29 | 107 |