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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca12g00661
ATGGACGGTGGAGCGCAGTACAACCATCGTACCGTGGAGGACGTTTTCAGGGACTTCAAGGGCCGAAGAACCGGCATAATCAAAGCTCTCACTACTGATGTTGAAGAATTTTTCCAGCAGTGCGATCCTGAAAAGGACAATCTTTGCCTGTATGGGTTCCCAAATGAACAGTGGGAAGTGAATTTACCTGCGGAAGAAGTCCCTCCGGAGCTTCCTGAGCCTGCATTGGGCATAAACTTTGCTAGGGATGGGATGCAAGAAAAGGACTGGCTGTCTTTGGTTGCTGTTCATGCTGATGCATGGTTACTTGCAGTGGCTTTCTTCTTTGGGGCAAGATTTGGTTTTGATAAAGCTGACAGGAAGCGCCTGTTCACTCTGATTAATGATCTACCAACAATATTTGAGGTCGTGACTGGAACTGCAACGAAACAGGTTAAGGAAAAGTCATCCATTTCCAACCTCAACAGCAACAAATCAAAGTCTGGCTCAAAAATGCGAGGATCTGATCCAGGGAAGTATTCAAAGCAAGCAAAGGACGAGGATGAGGGATTGGATGAAGAAGATGAGGAGGAGCATGGGGAGACCTTGTGTGGCGCATGCGGGGAGAACTATGCATCTGATGAGTTCTGGATTTGTTGTGACATATGTGAGAAGTGGTTCCATGGCAAGTGTGTGAAGATCACTCCTGCTAGGGCCGAGCACATTAAGCAGTATAAGTGTCCCTCATGCAGCAATAAGAGAGCACGGCCTTGA
753
0.4741
MDGGAQYNHRTVEDVFRDFKGRRTGIIKALTTDVEEFFQQCDPEKDNLCLYGFPNEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHADAWLLAVAFFFGARFGFDKADRKRLFTLINDLPTIFEVVTGTATKQVKEKSSISNLNSNKSKSGSKMRGSDPGKYSKQAKDEDEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRARP.
251
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca12g00661
250
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
187
245
IPR013083
-
Seca12g00661
250
FunFam
PHD finger alfin-like protein
189
245
-
-
Seca12g00661
250
Pfam
Alfin
11
139
IPR021998
GO:0006355|GO:0042393
Seca12g00661
250
PANTHER
CPG BINDING PROTEIN
8
249
IPR045104
GO:0006355|GO:0042393
Seca12g00661
250
MobiDBLite
consensus disorder prediction
148
190
-
-
Seca12g00661
250
Pfam
PHD-finger
197
246
IPR019787
-
Seca12g00661
250
MobiDBLite
consensus disorder prediction
148
164
-
-
Seca12g00661
250
ProSiteProfiles
Zinc finger PHD-type profile.
194
246
IPR019787
-
Seca12g00661
250
CDD
PHD_AL_plant
196
246
IPR044104
-
Seca12g00661
250
ProSitePatterns
Zinc finger PHD-type signature.
197
243
IPR019786
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca12g00661
Seca-Chr12
5958949
5961471
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca12g00661
1
249
Alfin-like Transcription Factor Family
AT3G42790
76.190
1.76e-124
352
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
Alfin-like
Seca12g00661
Alfin
2.7e-68
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca12g00661
K26274
-
gmx:100500110
425.631
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