Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00645 ATGCTTAGATCACCACAAATTCTGGCTATTGTTTTCTTCATTTCTGGTTTGCTTCACCTTCTCGTTAGATTCATATGGAGACCTCAAAGTAGAGAGCTTGATGATTTGGACAATATCACTGCTCTTCAAGGTCAAATGCAGCAACTCTTCCACCTCCATGACGCTGAGGTTGACCAGTCCTTCATTGCTACCCTCCCTATCTTCGTTTACAAAGTCATCATAGGATTGAAGAACCCTTTTGATTGTGCGGTTTGTTTGTGTGAATTTGAGGCAGAGGACAACAACCTAGCCATGCTTTTCACATGGCTCTTTTCAAGGGAGATTGTTCCAAAAAGAGAGGCTTCCGCTGCTGTTGTTGGAAGAACAAGTTCAGTTATCACAACAAATTCTCGTCTTGGTTGCCGTGGAGAAAGCGAATTTGGATCAACCAGTGTCGATTTGCGTGGTGATTTAGCTTCAAGTGAGAATCTTGATCCAAACATAGCAGGGGATGGTGTGGAGAAAGCTGTCACAATTAAGCTGGGAAAGTACATTAACATGGATGGTGGCTATGGGGAAGGAAGTAGCACCAACAATGTAGATGCTAGAAGGTGCTTTTCTATGGGGTCATTTGCTTATGTTTTGGATGAAAGTTCCTCACTCCAGGTAATGATTGTTTAG 660 0.4273 MLRSPQILAIVFFISGLLHLLVRFIWRPQSRELDDLDNITALQGQMQQLFHLHDAEVDQSFIATLPIFVYKVIIGLKNPFDCAVCLCEFEAEDNNLAMLFTWLFSREIVPKREASAAVVGRTSSVITTNSRLGCRGESEFGSTSVDLRGDLASSENLDPNIAGDGVEKAVTIKLGKYINMDGGYGEGSSTNNVDARRCFSMGSFAYVLDESSSLQVMIV. 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00645 219 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 7 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00645 Seca-Chr12 5805909 5806675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00645 16 218 C3H Transcription Factor Family AT2G18650 38.583 2.10e-45 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00645 - - gmx:100797283 281.952