Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00633 ATGGCTTCCATTTCCATGTCACGAACCGCAGTTCATCCACCGCAATTCCAGAGTTTGTTCTCCCATAGCCGCTGCAAATGCCCAAGAATCGCTGTTTCTTGGACCATGACTATGGATTCGGAATTTTCTTCACCAATGAGTAACAGGAAGAAGAAAGAAGCTTCAGTGCAGCTTTCAATCCCAACGCCACTCGTCTCACGAGTAGAAACTTCAAGATTCTGTGATCTCCGTTTTGACAGGTTGCAACCTTCGGATCACGAATTGGATCAACACAAAAGGTTAGAGTTTGGGCAATTCGTTGCACGAGAAGCCATGCTTGAGGAAGAGTATTGGACAGCAGCATGGCTGAGGACAGAAAGTCAATGGGAAAATCGATCAAATCAAAGGTATGACACACATGAATTTTATGCATTTCTTAATTACGAATATGATACGATAAAAAAGCGGTTAAAGAATTCGGAGAGTTACTCATGCATTATCACGGTGAAGAAGGAGGAGGAGAATGTAAAACGCGCAATAATAAAAAGTGTTGTAGGAACCCTTGATTTGAGTGTCCGATATTTGAGGATAGGGGAGACCTTTCCTGGGGAAAGGCCTAATGTTCCTATTTTTTGCCGCTTCAACAGAACACCATCAAGCAGATATGGTTATATTGCAAATGTATGCGTTACCAAATCAGCTCGTCGCCAGGGTATTGCAAGCAACATGGTGAATTTTGCTATTGAATCTGCAAAATCTAAGGGTGTGGAACGTATATATGTGCATGTGGACAGAAATAATGAACCTGCCCAGATATTGTACCAAAACTTGGGTTTTGAGATGGTTGAAATGGCAAACTCCCTGTTGTTAAACGATGAGACATACTTGCTTCGCTTACAGACGTAA 885 0.4215 MASISMSRTAVHPPQFQSLFSHSRCKCPRIAVSWTMTMDSEFSSPMSNRKKKEASVQLSIPTPLVSRVETSRFCDLRFDRLQPSDHELDQHKRLEFGQFVAREAMLEEEYWTAAWLRTESQWENRSNQRYDTHEFYAFLNYEYDTIKKRLKNSESYSCIITVKKEEENVKRAIIKSVVGTLDLSVRYLRIGETFPGERPNVPIFCRFNRTPSSRYGYIANVCVTKSARRQGIASNMVNFAIESAKSKGVERIYVHVDRNNEPAQILYQNLGFEMVEMANSLLLNDETYLLRLQT. 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00633 294 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 204 294 IPR000182 GO:0016747
Seca12g00633 294 Pfam Acetyltransferase (GNAT) family 141 272 IPR000182 GO:0016747
Seca12g00633 294 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 130 276 IPR016181 -
Seca12g00633 294 CDD NAT_SF 204 255 - -
Seca12g00633 294 Gene3D - 97 286 - -
Seca12g00633 294 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00633 Seca-Chr12 5707854 5710401 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Seca12g00633 Acetyltransf_1 1.5e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00633 - - gmx:100795426 356.295