Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00613 ATGGACTCACCTTCCTTTCTTTTCCTTCTCCTCCTGCAACTCGTGACGCTATCAGTCATGGCCAAGAAGACTTACATAGTTCACATGAAACACCACCACGATGCCTCCATCTACCCCACCCGCCATGACTGGTACTCTTCCACTCTCCAATCTTCCGATTCCCTTCTATATTCCTACACCCATGCTTACAACGGTTTTGCCGCTGCCCTTGACCCTCAACAAGCACACGCACTGCGCACTTCAGATTCAGTTATCGGCGTCTATGAGGACACCCTCTACTCGCTCCACACCACGCGCACACCGGAGTTCTTGGGCCTCCAAGCCCATTTTGGGCTATGGGAAGACTTCCACCGAGCTTCACACGACGTCGTAATAGGGGTTCTGGACACAGGCGTCTGGCCAGAATCCCAAAGCTTCGACGACTCTGAAATGCCGCAAATCCCCACTCGATGGCGCGGCCAGTGTGAGTCCGCACCTGATTTCGACCCTTCCCTCTGCAACAAGAAGCTAATCGGCGCTCGCAGCTTCTCCAAGGGCTACCGTATGGCCTCCGGCGGAGGTAGTTACAACAGGAAAAAAGCCACAGATCCTGCTTCGCCTCGGGACCGGGACGGCCACGGTACACACACCGCCTCCACCGCTGCTGGATCCGCCGTCGCTAACGCCACTCTCCTTGGCTACGCCACCGGCACTGCACGCGGGATGGCTCCTCAGGCGCGAATCGCTGCCTACAAGGTCTGCTGGACTGACGGCTGCTTCGCCTCAGACATACTCGCCGGAATGGATCAAGCGATCCAGGACGGCGTCGACGTGCTCTCGCTCTCCCTCGGCGGTTCCTCCTCCGCTCCTTACCACCGCGACACCATCGCAATCGGAGCCTTCACGGCGATGGAGAGGGGAATCTTCGTTTCGTGCTCGGCGGGGAATAACGGACCTCGAAGTGGCTCCTTGTCCAATGTAGCTCCATGGATCATGACCGTCGGAGCAGGGACGCTGGACCGTGATTTTCCGGCGTACGCAGAGCTCGGGAACGGGAAACGTCTCGCCGGCGTTTCGCTTTACAGCGGAGAAGGAATGGGCGACGAACCGGTTGGTTTGGTTTATTTTAATGACCAATCCAACACATCAAGCAGCATTTGCATGCCCGGTTCACTTGACCCGGCACTCGTGCGAGGGAAGGTGGTGGTTTGTGACAGGGGAGTGAACGCACGTGTGGAGAAGGGTGCGGTTGTGCGAGACGCTGGAGGAGTTGGGATGATACTTGCGAACACAGCAGTTAGCGGTGAGGGAGTGGTGGCGGATAGTCACTTGGTACCGGCTGTGGCAGTGGGTGAAAGCGCGGGTGATGAGATCAGAGAGTATGTAGCGTTGGATCCTAATCCAACGGCTGTTCTGAGTTTCGGTGGAACCGTGTTAAACGTGAGGCCTTCCCCTGTAGTGGCATCGTTTAGCTCTCGCGGGCCCAATGGTGTGACGCCCCAAATCCTGAAACCTGATATCATTGGGCCTGGAGTTAACATCTTAGCCGGATGGTCTGGTGCTGTTGGCCCCTCTGGCTCTCAAGACACTCGTAAAACTCATTTCAACATCATGTCTGGTACGTCTATGTCTTGTCCACACATAAGTGGGTTGGCTGCGTTACTGAAAGCGGCCCATCCAGATTGGAGTCCAAGTGCTATTAAATCTGCACTCATGACAACTGCCTATACCTATGATAACACCAAGTCTCCTCTCCGGGATTCAACAGGAGAGGCCCTCTCCACACCATGGGCTTATGGTGCGGGCCATGTCAACCCACAAAAAGCCCTCTCCCCGGGCCTAGTCTATGATGCTGACACTCAGGATTACATTGCATTCTTGTGCTCCTTGAACTATACACTTGACCATGTACAACTCATTGTCAAGCGTCCCGATGTGAATTGTTCCATCAATTTTGCTGACCCGGGGGAACTGAATTACCCATCCTTTTCGGTCGTGTTTGGAAGGAAGAGTGTTGTTCAATACACGCGCACACTCACAAACGTTGGGGAGCCAGGATCGGTCTATGACGTGGCAGTAAATGGGCCATCCGTGGTGGAGATAACTGTGAATCCTACCAGGCTTGTGTTTGGGGAAGTGGGGGAAAGGCAAACGTACACAGTGAGTTTTGTGTCCAAAAGGGGTGTTGCTGATTCGGTTACGTCTGAATTTGGTAGCATTACGTGGAGCAATGAACAACGCCAAGTTAGGAGCCCGGTTGCTTTTGCATGGACAGATTTATGA 2262 0.5451 MDSPSFLFLLLLQLVTLSVMAKKTYIVHMKHHHDASIYPTRHDWYSSTLQSSDSLLYSYTHAYNGFAAALDPQQAHALRTSDSVIGVYEDTLYSLHTTRTPEFLGLQAHFGLWEDFHRASHDVVIGVLDTGVWPESQSFDDSEMPQIPTRWRGQCESAPDFDPSLCNKKLIGARSFSKGYRMASGGGSYNRKKATDPASPRDRDGHGTHTASTAAGSAVANATLLGYATGTARGMAPQARIAAYKVCWTDGCFASDILAGMDQAIQDGVDVLSLSLGGSSSAPYHRDTIAIGAFTAMERGIFVSCSAGNNGPRSGSLSNVAPWIMTVGAGTLDRDFPAYAELGNGKRLAGVSLYSGEGMGDEPVGLVYFNDQSNTSSSICMPGSLDPALVRGKVVVCDRGVNARVEKGAVVRDAGGVGMILANTAVSGEGVVADSHLVPAVAVGESAGDEIREYVALDPNPTAVLSFGGTVLNVRPSPVVASFSSRGPNGVTPQILKPDIIGPGVNILAGWSGAVGPSGSQDTRKTHFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYTYDNTKSPLRDSTGEALSTPWAYGAGHVNPQKALSPGLVYDADTQDYIAFLCSLNYTLDHVQLIVKRPDVNCSINFADPGELNYPSFSVVFGRKSVVQYTRTLTNVGEPGSVYDVAVNGPSVVEITVNPTRLVFGEVGERQTYTVSFVSKRGVADSVTSEFGSITWSNEQRQVRSPVAFAWTDL. 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00613 753 CDD PA_subtilisin_like 342 463 - -
Seca12g00613 753 Gene3D Peptidase S8/S53 domain 122 616 IPR036852 GO:0004252|GO:0006508
Seca12g00613 753 MobiDBLite consensus disorder prediction 182 213 - -
Seca12g00613 753 Gene3D - 620 750 - -
Seca12g00613 753 Pfam Fibronectin type-III domain 650 747 IPR041469 -
Seca12g00613 753 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
Seca12g00613 753 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Seca12g00613 753 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Seca12g00613 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 747 IPR045051 -
Seca12g00613 753 SUPERFAMILY Protease propeptides/inhibitors 22 94 - -
Seca12g00613 753 FunFam Subtilisin-like protease SBT1.9 13 96 - -
Seca12g00613 753 SUPERFAMILY Subtilisin-like 95 607 IPR036852 GO:0004252|GO:0006508
Seca12g00613 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 96 IPR037045 -
Seca12g00613 753 ProSiteProfiles Serine proteases, subtilase domain profile. 92 603 - -
Seca12g00613 753 FunFam subtilisin-like protease SBT1.5 333 472 - -
Seca12g00613 753 FunFam Subtilisin-like protease SBT1.5 122 343 - -
Seca12g00613 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
Seca12g00613 753 Pfam PA domain 380 451 IPR003137 -
Seca12g00613 753 CDD Peptidases_S8_3 93 569 IPR034197 -
Seca12g00613 753 Gene3D - 333 472 - -
Seca12g00613 753 Pfam Peptidase inhibitor I9 24 96 IPR010259 -
Seca12g00613 753 FunFam Subtilisin-like protease SBT1.5 620 751 - -
Seca12g00613 753 Pfam Subtilase family 121 573 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00613 Seca-Chr12 5542314 5544996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00613 6 750 Subtilisin-like Serine Gene Family AT2G05920 67.738 0.0 1040
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00613 - - gmx:100786523 1236.86