Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00609 ATGGCAATTACAGGGTCAGAGTCTCAGGCTCCGATTCCCACAGTTGGAAGTGGCAAAACCGTTTCTCAGGTGGAAGTTGAGTGTGTGAAATGCGATTCATGTGGTTTCACAGAGGAATGCACCCCTGCATATATCTCAAGGCTGCGTCAGAGATACCAAGGTCGTTGGCTATGTGGGCTTTGTGCTGAGGCTGTGAAGGATGAGGTGGTGAGATCAGAGAGGGTTATCACCATGGAAGAAGCACTCAACCGCCATATCAGTTTCTGCAGAGAGTTCAGATCATCCACTGTTCTGAATAAAACAGAGCACCCCATCTTTGCCATGGGTAGGATTCTTCGGAGAAGCTTGGATTCTCCAAGGCCTCTTCGATCAAACTCAAGTGGGTCTCTTCCACCAGTTGATGGGGTTCGTGCTCCACCTCTGCTTCGATCAGAGAGTTGCTTCTCATCTATCTCTGGTTAA 462 0.4892 MAITGSESQAPIPTVGSGKTVSQVEVECVKCDSCGFTEECTPAYISRLRQRYQGRWLCGLCAEAVKDEVVRSERVITMEEALNRHISFCREFRSSTVLNKTEHPIFAMGRILRRSLDSPRPLRSNSSGSLPPVDGVRAPPLLRSESCFSSISG. 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00609 153 PANTHER OS01G0745000 PROTEIN 19 152 IPR012876 -
Seca12g00609 153 Pfam Protein of unknown function (DUF1677) 26 114 IPR012876 -
Seca12g00609 153 MobiDBLite consensus disorder prediction 117 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00609 Seca-Chr12 5502087 5502548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00609 - - gmx:100797385 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00609 12 5502087 5502548 Seca4g01164 4 18615728 18617116 ECH
Seca12g00609 12 5502087 5502548 Seca8g03335 8 95636192 95636614 ECH
Seca12g00609 12 5502087 5502548 Seca12g00609 12 5502087 5502548 ECH