Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00582 ATGCAGACACTCTGCCTCTGTATTCTACACTCTGTTTTCTTGCTCTTGTTCCTCTCTCCGCCCGGCGCCACCGCAGCAGGAACACCGCAAGATCTGCTCCGTTCATCGTGCGCTCAGGCGAGGTACCCAACCCTCTGCGTGCAGTCCCTCTCCAACCATGTAGGTTCCACCATGAAGCCCTTGGACCTCGCTCAAGCCGCCGTCAAAGTCAGCCTCGCTCACGCTCGCACCCTCTCTCTCTACCTCAACACACTACAACGCCCGTCTTCCAGCGACAGGCAGCGAGTTGCGGTGAGTGACTGCGTGGCGCAGATTTCCGACTCGGTGACCGAGTTGAACAGGACGCTGAACGAGTTACGACACCTGAGGATGGGAACGTTCCAGTGGCAGATGAGCAACGCCATGACATGGGTCAGCACTGCCTTGTCTAACGGTAACGTCTGTATCAACGGCTTAAACAGCAGTGAAGTTGACGAGAATCTCAAGGTGGACGTCAAACGAAGGGTGACGGACGTTTCCATGCTCACCAGCAACGCCTTGTACCTCATCGATCGCCTCCGTAATAGTAGGAGCAGGAATGGGAAGCGTCGTTCCAATTCCAAAAACTGA 609 0.5567 MQTLCLCILHSVFLLLFLSPPGATAAGTPQDLLRSSCAQARYPTLCVQSLSNHVGSTMKPLDLAQAAVKVSLAHARTLSLYLNTLQRPSSSDRQRVAVSDCVAQISDSVTELNRTLNELRHLRMGTFQWQMSNAMTWVSTALSNGNVCINGLNSSEVDENLKVDVKRRVTDVSMLTSNALYLIDRLRNSRSRNGKRRSNSKN. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00582 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 182 - -
Seca12g00582 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 188 IPR035513 -
Seca12g00582 202 SMART PMEI_2 28 182 IPR006501 GO:0004857
Seca12g00582 202 Pfam Plant invertase/pectin methylesterase inhibitor 32 181 IPR006501 GO:0004857
Seca12g00582 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 186 IPR035513 -
Seca12g00582 202 CDD PMEI-like_3 35 186 - -
Seca12g00582 202 NCBIfam pectinesterase inhibitor domain 9 186 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00582 Seca-Chr12 5235579 5236187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00582 32 198 Carbohydrate Esterase AT3G14310 24.419 2.82e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00582 - - mtr:25494163 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00582 12 5235579 5236187 Seca12g00582 12 5235579 5236187 ECH