Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00562 ATGGCGTCGTTAGAGAATGAACCTTCTCACTCTCCTTCTGCCTCTCACAAAACTCGTCCTCCTTCCCAAGTCTGTATGCAGAAATTTAGGTTATATGAAACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATATTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAACTAAACTTGCGTGAAGACTCCACCACATACACAGAAAGTGAATGTTCTGATCTTTTGAGGCGGATACATGAGGGGAACAAGGCCACGGGTGGACTGAAATTTGTTACAACTTGTTATGGAATTGTTGGGTTCATCAAATTTTTGGGGCCTTATTACATGCTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCGGTGGTCATACAGTATATGCTGTCTCAAAGACTGAGATGATTCCATTGCCAAATTCTTCGGTTCGGTCCAACATCATCAATTCTAAAAATGAAAACAGGTACAAGAAGCTCCTATGCACAGTGGACCTTACAAAGGACTTCTTTTTCAGCTACTCATACCACATTATGCGTAGTCTTCAAAGGAACTTTTGTGATAATGAGACGGGCCATGTCCTTTATGAGACTATGTTTGTCTGGAATGAGTTCTTAACTCGAGGAATTAGGAATCACCTCCAGAATACTATTTGGACAGTGGCACTAGTTTACGGCTTTTTTAAACAGGACACACTTATGATATCTGGACGGGAGTTCATACTAACACTCATTGCAAGACGATCACGCCATTATGCTGGAACTAGGTATTTAAGGCGAGGTGTTAATGAGAAGGGCAGAGTAGCAAATGATGTTGAGACAGAACAAATAGTCTTTGAGGATGTTTCGGAAGGTCTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCTCTTTTCTGGTCACAGGAAACCTCACGTCTAAATATTAAACCAGATATTATATTGTCAAAGAAGGATCAGAATTATCAAGCCACCAAACTTCACTTTGAAAATCTAGTCAAAAGATATGGGAACCCCATAATAATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTTCGTCAAGAGTTTGCTAATGCCATAGATTTCATTAATAAAGATTTGTCTGAGGAGAACAGGCTTAGGTTCCTTCACTGGGATCTGCACAAACATTTTCAGAGCAAAGCCACAAATGTCTTGCTGCTTCTAGGCAAAGTGGCTGCATATGCGTTGGCATTAACTGGTTTCTTCTATTGCCAAGTGACAACATCAACCCTGAGACCAGAAGACTGTCTAAAATGGCCATCCATAGATTTTGCATGCAGCAATGTTGATAAGGAAAGCTTTTCACCAACTAGTCACGATGATTTTGATAATGAGGATGCTAATAATTTAGAGAGAAAACCGAGTGAAGAAAACAATGTTTCCAATGAAAATCATTCTGTCAAACCACCCATGTTGCAGAGGGGGGTGCTTAGGACCAACTGCATAGATTGCTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGTCACCAGCTTCATGCACTGGGAATTATTGATCACCCAAGAATTGACCTTGATGATCCTGTAGCTGATGATTTAATGGGGTTTTATGAGCGGATGGGTGACACACTTGCACATCAGTATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGAGAGGAGGGGCCAATGGAGAGCTGCAACGCAGTCTCAGGAGTTTTTTAGGACTCTTCAACGTTATTACAGCAATGCTTACATGGATGCTGAGAAACAAGATGCAATCAATGTATTCCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGATTCAGATCAGCACTATGATACAGGGAGACATGGAGATGATGATGCAAGGTCATTTATCAAAAGATCCTTCTCAGATGGAAACATTCTTCGTGAAAGCTCTACACCTATGTCAGCTCCAAAAGCCAAGCATGAAAAATTTTCAAACCCAGGTTTACCAGACCGATCAGAAGAAGGAAGCAAGGCTTTTTGTGAATCATCACCTGAAATATCTACTACTGAGACTGAGAATGACATTTCATTTTCAAGGTACACTCCCTCAATGCCTCGGAGGCAGCTTTTTGGAGAAATGCAGAGAGAGCGCTGCCTTGAAGGTGATCATATTTACTATTCTGATCACGGTGATTCCTTCAGCTGCTCCAACTTTGTCGACCTAGATTGGCTATCGTCTTCAGGAAATTCATGTGAAGAAGAGCCATACGAGAGATGCAGGTCATCAATTACCAACTCTCCAGTTGCTGGGCTTTCCTCAGAAAATGTTGTCAATGGAGTGATGGTAGGAGAAACAACTGCCTCCACTAGTGATTGGGGCAGCTCAAGCCTGAAGGGAAGGGAGCAAACTGAATCAGAGTTATCCTACAGTGATGTGCGGTCCAACACTCCAGAGGAATTTCCAGATACTTTTGTACACTGGGTGACTTATGGACAGACACTTTGCCATTGA 2544 0.4222 MASLENEPSHSPSASHKTRPPSQVCMQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKATGGLKFVTTCYGIVGFIKFLGPYYMLLITKRRQIGAIGGHTVYAVSKTEMIPLPNSSVRSNIINSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNFCDNETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQDTLMISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQIVFEDVSEGLPIQISSIIQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYQATKLHFENLVKRYGNPIIILNLIKTHEKKPRESILRQEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKATNVLLLLGKVAAYALALTGFFYCQVTTSTLRPEDCLKWPSIDFACSNVDKESFSPTSHDDFDNEDANNLERKPSEENNVSNENHSVKPPMLQRGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHALGIIDHPRIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAEKQDAINVFLGHFQPQQGKPALWELDSDQHYDTGRHGDDDARSFIKRSFSDGNILRESSTPMSAPKAKHEKFSNPGLPDRSEEGSKAFCESSPEISTTETENDISFSRYTPSMPRRQLFGEMQRERCLEGDHIYYSDHGDSFSCSNFVDLDWLSSSGNSCEEEPYERCRSSITNSPVAGLSSENVVNGVMVGETTASTSDWGSSSLKGREQTESELSYSDVRSNTPEEFPDTFVHWVTYGQTLCH. 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00562 847 MobiDBLite consensus disorder prediction 455 480 - -
Seca12g00562 847 MobiDBLite consensus disorder prediction 692 710 - -
Seca12g00562 847 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 15 838 IPR043573 GO:0043813|GO:0046856
Seca12g00562 847 MobiDBLite consensus disorder prediction 1 22 - -
Seca12g00562 847 Pfam SacI homology domain 101 398 IPR002013 GO:0016791
Seca12g00562 847 MobiDBLite consensus disorder prediction 798 826 - -
Seca12g00562 847 ProSiteProfiles Sac phosphatase domain profile. 165 563 IPR002013 GO:0016791
Seca12g00562 847 MobiDBLite consensus disorder prediction 674 689 - -
Seca12g00562 847 MobiDBLite consensus disorder prediction 454 490 - -
Seca12g00562 847 MobiDBLite consensus disorder prediction 656 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00562 Seca-Chr12 5022688 5035467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00562 25 847 Acyl Lipid Metabolism Gene Families AT5G20840 62.923 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00562 K22913 - gmx:100810079 1521.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00562 12 5022688 5035467 Seca4g01161 4 18548719 18565882 ECH
Seca12g00562 12 5022688 5035467 Seca12g00562 12 5022688 5035467 ECH
Seca12g00562 12 5022688 5035467 Seca6g03653 6 103748284 103764681 PCT