Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00543 ATGGGAGGTTTAGTTAGGATGACACATCTCATGAGCCTGCTGCTGGTAATAGGATTATGCACCTTTGTTGTTGAAGGCAAAAAACATGTAAGCATCAAGAACAAACTAGGATCTGGGAAGAACCTGACTTTACATTGCCAATCCAAAGATAATGATCTGGGCGAGCAGAACATAGCAGATGGAGATCAATTTGGCTGGGACTTCAATGACAACATTTTTGAAACCACACTGTTTTTCTGTGATCTGTCATGGGAGAAAGCTCAGGGGTATCATTTTGATGCGTATTCCTCTGGCAGGGACTTTATACGATGTCACACTGGATGTTCGTGGCTAGTATCCGTTGAAGGCATTTACATCTTGAATGGACAAACAGGGTTGTGGGAATTCATATACAATTGGCAAACTGAGTGA 411 0.4209 MGGLVRMTHLMSLLLVIGLCTFVVEGKKHVSIKNKLGSGKNLTLHCQSKDNDLGEQNIADGDQFGWDFNDNIFETTLFFCDLSWEKAQGYHFDAYSSGRDFIRCHTGCSWLVSVEGIYILNGQTGLWEFIYNWQTE. 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00543 136 Pfam Plant self-incompatibility protein S1 29 133 IPR010264 -
Seca12g00543 136 PANTHER - 24 123 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00543 Seca-Chr12 4840877 4841287 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00543 27 136 Carbohydrate Esterase AT3G16970 31.858 3.29e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00543 - - gmx:102670225 207.608