Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00539 ATGTGCCAAACAAGCAAGAGTTCTGGGGGTATGAAGCTGCTATGGGTGTTTGGGTTTATGGGCTTGGTGGTTGTGAAATGGGTGGAAGGCTTCCAGAATGCCAGTGTGACAGACATGCAATATGTCCAAGAAGGAGGTTTCTACAACAGACCTTTGCTGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTACCACTTCCACCGTGGATATGGTTCAGGATCCAACAGTTGGCTCATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAGGAATTGTATTTACAGTAAAAAAACACGTCATGGCTCATCAATATATATGGAAAAGCAAATTCCATTTATTGGGATACTGAGCAACAAAGCTGAGGAAAATCCAGATTTTTTCAATTGGAATAGAGTAAAAATTCGTTATTGTGATGGTGCATCATTTAATGGGGACAGTCAAAATGAGGCAGCAAAGTTGTATTTCAGAGGGCAGCGCATCTGGCAAGCTGCTATGGAAGACTTAATGTCAAAAGGGATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCATCTATACTACATTGTGATGAATTTCGTGAACTGTTTCCTAGAACCACAAGAGTAAAGTGCTTAAGTGATGCTGGGTTATTCCTTGATGCTGTTGATGTATCTGGCCGTCGCAGTTTAAGGAATTTGTTTAGGAGTGTGGTCACCTTACAGGGAGTGCAAAGGAGCCTTCCAAGGAGTTGTACCAGTCACCTCAATCCAATTTTGTGCTTTTTCCCTCAGCACCTAATTGCCAGTGTGAGGACACCGCTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTCGCGCCACCATCTGCTGACTATCATTGGAATTGGATCGAATGCAGAAAAAACTACGCACGTTGCAGCGCACCACAGATACAATATTTGCAAGGTTTTCGCAATCAGATGCTTAGAGTTACAAGAGGCTTCTCAAGATCTCGTCAAAACGGGCTATTCATAAATTCATGTTTTGCTCATTGCCAATCTGAGAGACAGGATACATGGTTTGCTCGTGATTCTCCTCATATTGGAAATAAAGGAATCGCAGAGTCTGTTGGGAACTGGTTTTTTGACCGAGTTGGTGTGCAGGCTATAGGTTGCCCTTACCCTTGTGACAAAACCTGTCATAATTTGGTTTTCAAGTGA 1254 0.4346 MCQTSKSSGGMKLLWVFGFMGLVVVKWVEGFQNASVTDMQYVQEGGFYNRPLLVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIRNCIYSKKTRHGSSIYMEKQIPFIGILSNKAEENPDFFNWNRVKIRYCDGASFNGDSQNEAAKLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLASILHCDEFRELFPRTTRVKCLSDAGLFLDAVDVSGRRSLRNLFRSVVTLQGVQRSLPRSCTSHLNPILCFFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYHWNWIECRKNYARCSAPQIQYLQGFRNQMLRVTRGFSRSRQNGLFINSCFAHCQSERQDTWFARDSPHIGNKGIAESVGNWFFDRVGVQAIGCPYPCDKTCHNLVFK. 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00539 417 PANTHER NOTUM-RELATED 52 413 IPR004963 GO:0016787
Seca12g00539 417 Pfam Pectinacetylesterase 52 395 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00539 Seca-Chr12 4799408 4806135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00539 53 417 Carbohydrate Esterase AT1G57590 70.685 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00539 K19882 - gmx:100791571 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca12g00539 12 4799408 4806135 Seca12g00539 12 4799408 4806135 ECH
Seca12g00539 12 4799408 4806135 Seca8g06547 8 159976011 159980837 ECH
Seca12g00539 12 4799408 4806135 Seca2g05188 2 138364512 138368082 ECH