Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00528 ATGGGGGATGAGGTGGTGTCATTGGGTTTCAGTCTCAGTATGTTTGGGGGAAGAGTGAGGATTGCACTGGCAGAGAAAGGGATTAAGTATGAGTACATGGATGTGGATTTTGTGAACACCAAGAGTGCATTGCTTCTGCAAATGAACCCCGTTCACAAGAAAATCCCTGTCCTTATCCATAATGATCCATACAAGAGAGCCCAAGCCAGGTTCTGGGCTGATTTTGTTGATAACAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGATGAACATGAGAAAGAAAAGAAGGAATTAATAGAGAATTTGAAGCAATTGGAGGAGTTTCTTGGGGACAAGCCATACTTTGGGGATAACACATTTGGGTTTCTTGATGTTGCTTTCATTCCTTTCTATAAATGTTTTTATGCTTATGAGGCATTTGGAAAATCGAAGTTAGACTGCCCAAAACTCACTGCATGGGGAAAGAGATGCTTGCAGAGAGAAAGTGTGTCCAAATTCCTTTCGGACGAAAAAGAGATCTATGAGTTTGTTCTGAGCTACAGGAAAAAAATTGGAGTGGACAAAGACACCAAAGCCAACTAA 594 0.4141 MGDEVVSLGFSLSMFGGRVRIALAEKGIKYEYMDVDFVNTKSALLLQMNPVHKKIPVLIHNDPYKRAQARFWADFVDNKVHEVAKKIWTGKVDEHEKEKKELIENLKQLEEFLGDKPYFGDNTFGFLDVAFIPFYKCFYAYEAFGKSKLDCPKLTAWGKRCLQRESVSKFLSDEKEIYEFVLSYRKKIGVDKDTKAN. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00528 197 CDD GST_C_Tau 63 184 IPR045074 GO:0004364|GO:0006749
Seca12g00528 197 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Seca12g00528 197 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 62 179 IPR045073 -
Seca12g00528 197 Pfam Glutathione S-transferase, N-terminal domain 14 62 IPR004045 -
Seca12g00528 197 SUPERFAMILY Thioredoxin-like 9 62 IPR036249 -
Seca12g00528 197 Pfam Glutathione S-transferase, C-terminal domain 90 165 IPR004046 -
Seca12g00528 197 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 62 190 IPR010987 -
Seca12g00528 197 FunFam Glutathione S-transferase U20 62 191 - -
Seca12g00528 197 Gene3D Glutaredoxin 3 63 - -
Seca12g00528 197 SUPERFAMILY GST C-terminal domain-like 56 188 IPR036282 -
Seca12g00528 197 Coils Coil 85 112 - -
Seca12g00528 197 Gene3D - 64 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00528 Seca-Chr12 4698420 4699265 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00528 1 191 Glutathione S-transferase Gene Family AT1G17180 51.818 2.23e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00528 K00799 - gmx:100781460 266.159