Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00492 ATGGAGTTAACTCCAAGATCCTTAACTCCAAGATCTTTAACTCCAAAATCTTTGACTCCAAGATCTTTAACTCCACTAGCCTTAACTCCAAGAGGTTTAACTCCAAGGGGGATAAATCAAGGTCATGTCTTCAGCTTTGATAGAGATGCAGATTCTTTTGTGGAGGAAGATAAGGAGCTTCAGTCAAAGTGGGCTGCTATTGAGAAGTTACCTACTTTCAAACGGATTAAAACTTCTTTTGTTGATGTCAGTCAGGAAGAGGGTGAAAGCAGCAGCAAAGAAGCAGATGGCAAAAGGGTGATTGATGTTACCAAGCTTGGAGCAGTGGAAAAGCGTTTGTTCATTGACAGGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGACAGAGTCAATGTGAAGTTACCTACTGTGGAGGTCAAGTACAAAAACCTGCATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTCCCTACTTTATGGAACTCTTTTTCTAGCTTATTGCAAACACGGGCTAATTTGTCACTTGAACAGGGTTTCATGAAAACTATATCGTGTAATTCTCAAGGAGCCGATATAAGCATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGCTGTGGGAAAACGACCTTGTTAATGGCACTGGCTGGAAAACTAGAGGAATCTCTCAAGGTTTCTGGCGAAATCTCATACAATGGTTACAAACTAGATGAATTTTTTCCTCAAAAAACATCAGCTTACATAAGCCAGTATGACCTGCACGTTCCTGAGATGACAGTGAGAGAAACAATTGACTTTTCGGCACGCTGTCAGGGTGTTGGAAGCAGAGCTGATATAGTAGCTGAAGTCACCAGGAGAGAAAAAGAAGAAGGAATCATCCCTGACCCAGATATTGATACCTACATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTGTAAAGATTCTCGGACTGGATATCTGTGCTGACATTCTGGTTGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTGGGTCCCATAAAGACTCTTTTCATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTGCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCAGCACCAGAAACCTTTGAGTTGTTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCCGCAGTCAAGCAATCCAATTTTTCAATGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTAGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAGTATTGGTACCGCACAGATATTCCTTACAGATATATATCAGTGGATGAGTTCTCTCAAATCTTCAAAACAAGTTATTGGGGAAGAATGTTAGCTGCTGAGCTCTCACACCCATATGATAAATCTCAATCCCAAAAAAGTGCTTTATCATTTAGCAAGTACTCCTTGGGAAAAATGGAATTGTTTAAAGCATGTATGAAGAGGGAGATTCTTCTCATGAAAAGGAATTCATTTATCTATGTATTCAAAACTGTACAGCTTACAATTACTGCAATCATAACAATGACAGTCTTCTTGCGTACTCAGCTGACTGTGGACTTGATAGGGGCTAACTATTTATTGGGTTCATTGTACTATACACTTGTACGCCTCATGACTAATGGAGTTGCTGAGTTGATCATGACTATTACTAGACTTCCTGTAGTTTATAAGCAGAAGGCATTCTATCTTTATCCAGCTTGGGCCTACTGTCTTCCAGCTTCCATTCTAAAGATTCCATTTTCAGTGCTTGATTCTATTGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGCAATTTCTTTTGCTAGTCACTCTGCACATGTCATCAACTTCCATGTGTCGTTTCCTTGCCTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTACCAAAGTGGTTGAGGTGGGGCTTTTGGCTCTCTCCAATGACATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGGTCCTCGCTGGCAGAAGATCCAAAATGGAAACATCACAGTAGGAAGGGAGGTTCTTAGGGATCATGGTTTAGACTTTGATAGCAACTTCTATTGGCTATCAGTTGGAGCCCTGCTTGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTGGCATTAACTTACTTAAAACAGCCTAAGCAATCTCGAGCTTTAGTCTCAAAAAAGAAGCTCTCTCAACTAAAAGGAGGAGAAAAAAGCAACGGTGTGGAACTGAAAAATAAGTCAGTTGCAGTTGATATTGGCCACACATCAAAGGAAACTCAAAGCACAGGGAAAATGGTCCTGCCCTTTGAGCCACTGTCAATAGCATTTAAAGATGTCCAGTATTTTGTTGAAACTCCTCCGGAGATGAGAAAACATGGTTCCAATGAGAAAAAACTACAATTGCTCCGTGATATCACAGGAGCCTTTAGGCCAGGAATTCTTACTGCATTGATGGGAGTCAGTGGAGCAGGGAAGACAACTCTTATGGATGTCCTTTCAGGAAGGAAAACTGGTGGTATCATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAGTGCAGAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAAAATGACATACATTCTCCATATATAACAGTTGAAGAATCTGTCAAATACTCAGCTTGGTTGAGGTTGCCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATTCTTTAGTTGGCATCCCTGGCCAAAGTGGCTTATCTACCGAACAACGTAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATATTTATGGATGAACCTACATCAGGTTTGGATGCCCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGTAGGACCACTGTTTGCACAATACACCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGGCAGATTATTTATAATGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAGTATTCCTGGAGTTCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCGTCTGTAGAAGCAGAACTTCAAATAGATTTTGCAAAAATCTATAAGGAGTCACACCTTCACCGGGATACCCTTGAAATGGTGAGACAGTTAAGTGAACCACCACCAGGTTCAAGAGACTTACACTTCTCAACTCCCTTCCCACAAAATAACTTGGGGCAGTTCATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCGTGTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGAAATGAAATAAACAATCAACAGGATTTGTTCAACGTGCTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATTACTGCTCAACGATTTTACCGTATGTGGCAACTGAGCGCTCTGTCTTGTATAGAGAAAAATTTGCTGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAATCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCAGTGGTCAGTTCAGAAGGTCTTTTGGTACTTCTACACCACATTCTGCACATTTTTATACTTTGTATATCTTGGAATGCTGATAATGGCAGTGAGTGCAAATCTCGATTTAGCTTCAGTATTATCAACTGCAATCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCAAAATGGTGGGTTTGGTGCTACTGGATTTGCCCTACGGCTTGGTCCTTGAATGGCCTCCTAACTTCACAATATGGAGGCATGGACAAAGAGATACTGATATTTGGGGTGAAAAAATCAGTTGGATCCTTTCTGAAAGATTACTATGGGTTCCGGCATGACAGATTAAGCCTTGTGGCTGTGGTGCTCATTGCTTACCCAATTGTATATGCTTCTCTCTTTGCCTATTGCATAGGGAAAATGAATTACCAAAAGAGATAG 4407 0.4053 MELTPRSLTPRSLTPKSLTPRSLTPLALTPRGLTPRGINQGHVFSFDRDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDVSQEEGESSSKEADGKRVIDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMDRVNVKLPTVEVKYKNLHVEAECEVVQGKPLPTLWNSFSSLLQTRANLSLEQGFMKTISCNSQGADISILNDVSGIIKPSRLTLLLGPPGCGKTTLLMALAGKLEESLKVSGEISYNGYKLDEFFPQKTSAYISQYDLHVPEMTVRETIDFSARCQGVGSRADIVAEVTRREKEEGIIPDPDIDTYMKAISVEGQSENLQTEYVVKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPRSQAIQFFNDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDIPYRYISVDEFSQIFKTSYWGRMLAAELSHPYDKSQSQKSALSFSKYSLGKMELFKACMKREILLMKRNSFIYVFKTVQLTITAIITMTVFLRTQLTVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEITRQFLLLVTLHMSSTSMCRFLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMTYGEIGITLNEFLGPRWQKIQNGNITVGREVLRDHGLDFDSNFYWLSVGALLGFTVLFDFGFILALTYLKQPKQSRALVSKKKLSQLKGGEKSNGVELKNKSVAVDIGHTSKETQSTGKMVLPFEPLSIAFKDVQYFVETPPEMRKHGSNEKKLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVEEVLETIELDDIKDSLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYNGMLGHHSSRLIEYFQSIPGVPKIKDNYNPATWMLEATSASVEAELQIDFAKIYKESHLHRDTLEMVRQLSEPPPGSRDLHFSTPFPQNNLGQFMACLWKQHLSYWRSPEYNLTRFVFMVVAAVIFGAVFWQKGNEINNQQDLFNVLGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQSILYVAITYPMIGFQWSVQKVFWYFYTTFCTFLYFVYLGMLIMAVSANLDLASVLSTAIYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGGMDKEILIFGVKKSVGSFLKDYYGFRHDRLSLVAVVLIAYPIVYASLFAYCIGKMNYQKR. 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00492 1468 FunFam ABC transporter G family member 34 882 1114 - -
Seca12g00492 1468 Pfam ABC-2 type transporter 1077 1146 IPR043926 GO:0140359
Seca12g00492 1468 Pfam ABC-2 type transporter 422 502 IPR043926 GO:0140359
Seca12g00492 1468 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 52 1468 - -
Seca12g00492 1468 MobiDBLite consensus disorder prediction 1 34 - -
Seca12g00492 1468 CDD ABCG_PDR_domain2 865 1103 IPR034003 -
Seca12g00492 1468 CDD ABCG_PDR_domain1 204 446 IPR034001 -
Seca12g00492 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 192 464 IPR003439 GO:0005524
Seca12g00492 1468 Gene3D - 882 1114 IPR027417 -
Seca12g00492 1468 Gene3D - 192 457 IPR027417 -
Seca12g00492 1468 Pfam ABC-2 type transporter 1194 1406 IPR013525 GO:0016020|GO:0140359
Seca12g00492 1468 Pfam ABC-2 type transporter 543 751 IPR013525 GO:0016020|GO:0140359
Seca12g00492 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 892 1101 IPR027417 -
Seca12g00492 1468 MobiDBLite consensus disorder prediction 1 24 - -
Seca12g00492 1468 Pfam ABC transporter 207 389 IPR003439 GO:0005524
Seca12g00492 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 868 1121 IPR003439 GO:0005524
Seca12g00492 1468 Pfam Plant PDR ABC transporter associated 756 818 IPR013581 -
Seca12g00492 1468 Pfam ABC transporter 896 1048 IPR003439 GO:0005524
Seca12g00492 1468 SMART AAA_5 216 448 IPR003593 GO:0016887
Seca12g00492 1468 SMART AAA_5 905 1097 IPR003593 GO:0016887
Seca12g00492 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 464 IPR027417 -
Seca12g00492 1468 FunFam ABC transporter G family member 34 194 498 - -
Seca12g00492 1468 Pfam ABC-transporter N-terminal 117 173 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00492 Seca-Chr12 4393027 4402209 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00492 893 1080 Calmodulin-binding Proteins AT2G36910 28.571 2.29e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00492 K08711 - gmx:100779615 2546.15