Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00446 ATGCAACTAGTGCTATTGTTTCTAGTTATACTCAAGCTCACTTCAGCATTTGCAACCACATTAAACGATGCATATGGTGGTGATACTGGCTGTCCATTTGGGACTGACATATACCAATACACTTGCCCAGAAGCAGAGGCCATCATCTTCTCTTGGGTGGAACAGGCAGTATCTCAAGACTCAAGAATGGCTGCCTCACTGCTTAGGCTACATTTTCATGATTGCTTTGTCAATGCAAGACATTCTTTGCCTGCTTATGTTGGTTGTGATGCTTCAGTCTTGCTGGATGATACACAAGACTTTGTTGGTGAGAAAACTGCTGGTCCAAACTTGAATTCACTCAGAGGATTTGAAGTAATTGACCAAATCAAATCTGAACTAGAACTAGTCTGTCCACAGACTGTCTCTTGTGCTGACATACTGGCTACTGTTGCTCGAGATTCAGTGCTTCTGTCAGGAGGTCCAACATGGGAGGTGCAAATGGGAAGAAAAGATGGCATGACTGCTAGCAAGGAAGCTGCAAATAATAACATTCCAGCCCCAAACTCAACTGTTGATGTGCTCACAGCAAAGTTTGAGAATGTAGGCCTTACACTCAAAGACATGGTTGCCCTCTCAGGTTCGCATACAATAGGAAAGGCCCGTTGCTCAACATTTAGCTCTCGTTTACAGAGTAGCAGTGACTCGGATAATCAATATGTTAATATTGATTTCATTGCATCATTGCAACAATTGTGCTCAGGAACAGATATTAACAATCGAGTTGCACATCTTGACCTGGCCACTCCAGCTACGTTCGATAACCAATACTATATTAATCTTCTTTCTGGCGAGGGTTTGCTTCAATCAGACCAGGCTCTGGTGAATGGGAATGATCAGGCACGACAGATTGTCGAAACTTATGTGGAGAATCCATTCGCTTTCTTTGAGGACTTCAAAGACTCAATGTTGAAAATGGGAAGCTTGGGATTACTTACTCAGAGTAACGGCGAGATTCGTAGGGACTGCCGCACTATTAATTAA 1023 0.4301 MQLVLLFLVILKLTSAFATTLNDAYGGDTGCPFGTDIYQYTCPEAEAIIFSWVEQAVSQDSRMAASLLRLHFHDCFVNARHSLPAYVGCDASVLLDDTQDFVGEKTAGPNLNSLRGFEVIDQIKSELELVCPQTVSCADILATVARDSVLLSGGPTWEVQMGRKDGMTASKEAANNNIPAPNSTVDVLTAKFENVGLTLKDMVALSGSHTIGKARCSTFSSRLQSSSDSDNQYVNIDFIASLQQLCSGTDINNRVAHLDLATPATFDNQYYINLLSGEGLLQSDQALVNGNDQARQIVETYVENPFAFFEDFKDSMLKMGSLGLLTQSNGEIRRDCRTIN. 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00446 340 CDD secretory_peroxidase 36 337 IPR033905 GO:0004601|GO:0042744
Seca12g00446 340 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Seca12g00446 340 PANTHER PEROXIDASE 72-RELATED 35 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Seca12g00446 340 Gene3D - 38 340 - -
Seca12g00446 340 ProSiteProfiles Plant heme peroxidase family profile. 32 340 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 SUPERFAMILY Heme-dependent peroxidases 34 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 Pfam Peroxidase 53 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 314 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 FunFam Peroxidase 36 192 - -
Seca12g00446 340 Gene3D Peroxidase, domain 2 179 320 - -
Seca12g00446 340 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00446 340 FunFam Peroxidase 179 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00446 Seca-Chr12 3906694 3908086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00446 27 340 Peroxidase AT4G16270 60.185 4.75e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00446 K00430 - gmx:100787637 550.051