Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00402 ATGGCGAAGTCGAAGAACCACACGGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATAAAAAAGCCAAAGAGGCACCGCCACACTTCCACCAAAGGGATGGATCCCAAATTTTTGAGGAACCAGAGGTACGCAAGGAAGCATAACAAGAAGAACGGTGAAGCAGCCACTGAAGAAGAGTAA 186 0.4892 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGEAATEEE. 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00402 61 MobiDBLite consensus disorder prediction 1 61 - -
Seca12g00402 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 59 IPR002673 GO:0003735|GO:0005840|GO:0006412
Seca12g00402 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Seca12g00402 61 Gene3D - 1 61 - -
Seca12g00402 61 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00402 Seca-Chr12 3497881 3499643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00402 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 5.89e-33 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00402 K02905 - tcc:18603616 129.028