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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca12g00362
ATGTGTGGTGGTGCAATTATTTCTGATTACATAGATGACAACCCCAACCTTGGTTGCCGGAGATTGACCACCGACGACATCTGGTCAGAGCTTCACACTTTCTCTGACCTCCTTGGTTTCGAAGTCGCCTCTTCTTCCCACCACCAATCACCCTTCTCCCACCTTCATCATCCCAACCTCCCTCTAAAACCAAACAACAAAGGTACGTTACGTACTACCTATTTCATTATTTTTTTTAGTATTTCCACGACTATTATTTCCTCCCATCCCCTTACTAGATGCCTTTTCTTGTTGGAGAAGAAAAAAGTGGTGGTAGCAAATAAGGAAAGAGGCAAGAGTGAGGGTGGTAAGTGTAAGCGGGTTCGAAAGAACGTGTACAGAGGAATCAGGCAAAGGCCATGGGGCAAGTGGGCCGCTGAGATAAGGGACCCACACAAGGGTGCACGTGTCTGGCTCGGCACCTTCAACACCGCCGAAGAAGCTGCCCTAGCTTACGACGCTGCCGCTAAGCGCATCCGCCGAGACAAGGCTAAGCTCAACTTTCCAGACAAGAAGCCTTGCCTCACTCAGCCCAGTGGGCCACCCGAGGCCCACGGTGACCAGGATCCTGATCAGCTGAAGCATCAAATCGAATCATTCCTGGGCTTAGAATTAGAGCATGATCAGGCTCAGGCTCATGAGGTGCTTGGTATTGGTGAATGGGACAGCAGGGACCTGTGGACGCTGGACGACATCGTTATGTCCAACCGTCACCTGTTTTCAGGCGGAATTTGA
774
0.5052
MCGGAIISDYIDDNPNLGCRRLTTDDIWSELHTFSDLLGFEVASSSHHQSPFSHLHHPNLPLKPNNKGTLRTTYFIIFFSISTTIISSHPLTRCLFLLEKKKVVVANKERGKSEGGKCKRVRKNVYRGIRQRPWGKWAAEIRDPHKGARVWLGTFNTAEEAALAYDAAAKRIRRDKAKLNFPDKKPCLTQPSGPPEAHGDQDPDQLKHQIESFLGLELEHDQAQAHEVLGIGEWDSRDLWTLDDIVMSNRHLFSGGI.
258
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca12g00362
257
MobiDBLite
consensus disorder prediction
181
203
-
-
Seca12g00362
257
Pfam
AP2 domain
125
173
IPR001471
GO:0003700|GO:0006355
Seca12g00362
257
FunFam
Ethylene-responsive transcription factor 2
124
183
-
-
Seca12g00362
257
Gene3D
AP2/ERF domain
125
183
IPR036955
GO:0003700|GO:0006355
Seca12g00362
257
PRINTS
Ethylene responsive element binding protein signature
148
164
IPR001471
GO:0003700|GO:0006355
Seca12g00362
257
PRINTS
Ethylene responsive element binding protein signature
126
137
IPR001471
GO:0003700|GO:0006355
Seca12g00362
257
CDD
AP2
126
183
IPR001471
GO:0003700|GO:0006355
Seca12g00362
257
SUPERFAMILY
DNA-binding domain
125
183
IPR016177
GO:0003677
Seca12g00362
257
ProSiteProfiles
AP2/ERF domain profile.
125
182
IPR001471
GO:0003700|GO:0006355
Seca12g00362
257
SMART
rav1_2
125
188
IPR001471
GO:0003700|GO:0006355
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca12g00362
Seca-Chr12
3177644
3179367
Dispersed/Tandem
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca12g00362
1
248
AP2-EREBP Transcription Factor Family
AT3G16770
38.851
4.23e-45
150
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Seca12g00362
AP2
4e-15
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca12g00362
K09286
-
cave:132186034
169.859
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