Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00342 ATGTTCATTACTAGATTGTTGAGTGGCTGTGTTTGTTACTCTGTGAATAGGAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTTTGTATTGTAGGATTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGCAATTCAGCAAGAAGTACAGGATCCACTGGTGCAAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAACTGGTTGTAAAGAGGCACAATGAAATAAAAGAGAGCAAGCGAAACAATGATGGAAATGAGGCGAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACCACTGATAATGACCGTCAGACAAGGATTGAAGGGGCAGAGATAAATAAGAGTCTTTTGGCTTTGAAGGAGTGCATTCGTGCATTGGACAATGACCAGATCCATATTCCTTTTCGTGGAAGCAAACTTACAGAAGTGCTCCGTGACTCCTTTGTTGGCAATTCAAAAACTGTTATGATCTCTTGTATATCTCCAAACGCTGGATCTTGTGAACACACACTAAATACCTTGAGATATGCAGATCGAGTTAAAAGTCTATCCAAAAGTGGAAATCCTAGAAAGGACCAGGCCCCAATTCCAGCACCACAAACAAATAAGGAGGTTTCATCCACATCATCCCTTCCAGCTAGTGTTGGTGCACAGGATTTTAGTGATCAACGTCAAGAGGTGAAGACAGTGGATATGGGCAGGAAAGTTATTGAAAAGGAGAATTCTTTATACAGATCTGCTGCTGATGTTGACAAACAACCATCAAGCTTTTCTTCAAGTTATCCATTCAATGGGCGAGAGGAAAAAGGCTTGGCTTCTGCCTCAATGGACAGGGACAGGTTTGCAGTGAAGAATTCTTACAATGATTCTACCAGTCAAAAGATGAACTCTTATTCCCAAAATGATACAGATGAGAGAGTGCAAAAGGTCTCTCCCACACGCAGAAAAGGGTCCAAGGAGGAGAAGTCTGAAAGGTCTGCAAACTGGCTGAAAAGGGATACCAATGGTTCTGATCACTTAACCACAAGCTCCAAGCAGCAGAGCGCAGGGAATTATAACACAGTTACCACTGGATCCAGACAGTCTGAAACAGAATCCTCTCCTGATGTGAACATCAGTGCAATACTTGAGGAGGAAGAAGCACTAATTGCTGCTCATAGGAAAGAAATTGAGGACACAATGGAGATTGTTCGTGAAGAAATGAAACTATTGGCCGAAGTGGACCAGCCAGGAAGTCTCATTGACAACTACGTAACCCAGTTGAGTTTTGTGCTTTCTCGCAAAACAGCTAGTCTCGTCAGTCTTCAAGCTCGCCTGGAAAGATTCCAACATCGACTAAAAGAACAGGAGATACTAAGTAGAAAAAGAGTACCCCGTTAA 1443 0.4241 MFITRLLSGCVCYSVNRKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNSARSTGSTGANEESSRSHAILQLVVKRHNEIKESKRNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPIPAPQTNKEVSSTSSLPASVGAQDFSDQRQEVKTVDMGRKVIEKENSLYRSAADVDKQPSSFSSSYPFNGREEKGLASASMDRDRFAVKNSYNDSTSQKMNSYSQNDTDERVQKVSPTRRKGSKEEKSERSANWLKRDTNGSDHLTTSSKQQSAGNYNTVTTGSRQSETESSPDVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKTASLVSLQARLERFQHRLKEQEILSRKRVPR. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00342 480 MobiDBLite consensus disorder prediction 354 392 - -
Seca12g00342 480 Coils Coil 397 428 - -
Seca12g00342 480 ProSiteProfiles Kinesin motor domain profile. 1 204 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g00342 480 MobiDBLite consensus disorder prediction 204 254 - -
Seca12g00342 480 FunFam Kinesin-like protein 104 163 - -
Seca12g00342 480 Coils Coil 453 473 - -
Seca12g00342 480 PRINTS Kinesin heavy chain signature 104 122 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g00342 480 PRINTS Kinesin heavy chain signature 154 175 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g00342 480 PRINTS Kinesin heavy chain signature 61 78 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g00342 480 Pfam Kinesin motor domain 16 203 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g00342 480 ProSitePatterns Kinesin motor domain signature. 103 114 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca12g00342 480 PANTHER KINESIN-RELATED PROTEIN 6 17 478 IPR027640 GO:0003777|GO:0007018
Seca12g00342 480 MobiDBLite consensus disorder prediction 266 392 - -
Seca12g00342 480 SMART kinesin_4 1 210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca12g00342 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 204 IPR027417 -
Seca12g00342 480 MobiDBLite consensus disorder prediction 269 284 - -
Seca12g00342 480 Gene3D Kinesin motor domain 3 203 IPR036961 -
Seca12g00342 480 MobiDBLite consensus disorder prediction 328 353 - -
Seca12g00342 480 MobiDBLite consensus disorder prediction 220 244 - -
Seca12g00342 480 MobiDBLite consensus disorder prediction 306 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00342 Seca-Chr12 3020601 3027969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00342 18 204 Calmodulin-binding Proteins AT5G65930 36.898 1.23e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00342 K10393 - gmx:100778915 778.474