Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00313 ATGAGTTTTTGGATCCGCCAGCTTGGTTGGGATCCTTCTCCTCTTCTAGCATTTCCTATACTTTTTGGATATAGTTTGGAGAAAAGGCTTATTCCAAGGGCTTCAGTTGTTCAGTATCTTCTCTCCAAAGGCTTGATGAAGAATGGTGCTAGCTTAGCTACACCATTTCGTATTTCTGATGAGTTGTTCTTGCAAAGGTTTGTCAATTGTTTTGAGAAGGAGGAAGCATCTAGGCTACTAAGGTTATATCAAGGAGGATGCTAG 264 0.4091 MSFWIRQLGWDPSPLLAFPILFGYSLEKRLIPRASVVQYLLSKGLMKNGASLATPFRISDELFLQRFVNCFEKEEASRLLRLYQGGC. 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00313 87 Gene3D Transcription termination factor 3, mitochondrial 1 79 IPR038538 -
Seca12g00313 87 PANTHER CGI-12 PROTEIN-RELATED 1 75 IPR003690 GO:0003690|GO:0006355
Seca12g00313 87 Pfam mTERF 1 64 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00313 Seca-Chr12 2825249 2825512 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Seca12g00313 mTERF 3.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00313 K15032 - gmx:102666739 100.523