Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00205 ATGATATCCTTAGTCAAGTACACAGCATCTCCCCTGACCCTGAGCACCTCTGCTTCCTCAAGTCCTGTTCCAAGGCCTCAACTTTGCACATTACCCACTATTCAAAACGTTCAAGAAAGCACTAAACCCTATCTCTCTTCCTTAAAACCTCTTTACATTTCATCCACTGAGAACTTCATATTGTCAAATAAACTCAGAAGAAGCGTTACAGAGTGCAAGGCCTATGAAGCAGATAGGTCACGGCCACTAGATATTAACATTGACCTTCCTGATGAACAGGCAGGATTGGAGACAGCTAAAAGGCTCAAAATTGGTTTGTATTTTGCAACGTGGTGGGCTTTGAATGTGGTCTTCAATATATACAACAAGAAGGTGTTGAATGCTTTTCCTTACCCATGGCTTACTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATGATGTTAATCTCATGGGCCACAAGGGTTGCTGATGTCCCAAAAGTTAACTTGGACTTTTGGAAGGCCCTCTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCCTTTACTCATATCATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTATCAAGGTTCCTGCTTGGGGAAGCATTTCCTATGCAGGTTTACCTGTCACTGTTACCTATTATTGGAGGTTGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATTGGTTTTATGGGGGCTATGATATCCAATTTGGCCTTTGTGTTTCGGAATATATTCTCAAAAAAGGGAATGAAGGGGATGTCTGTTAGTGGAATGAACTACTATGCTTGCCTTTCCATTTTATCACTATTGATTCTCACACCTTTTGCCATTGCTGTGGAGGGCCCAAAGATGTGGGCTGCTGGCTGGCAAACAGCCCTCTCTCAGATTGGTCCCAATTTTGTCTGGTGGGTAGCAGCCCAGAGTGTCTTCTACCACTTGTACAATCAAGTGTCTTACATGTCCCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCAGTAATTGTCTCTTCCATCCTTATCTTTCACACGCCAATTCAACCAGTCAATGCCCTTGGTGCCGCTATTGCAATTCTTGGCACCTTCCTCTATTCACAGGTTTGTTTTCATATCTCTTAG 1197 0.4361 MISLVKYTASPLTLSTSASSSPVPRPQLCTLPTIQNVQESTKPYLSSLKPLYISSTENFILSNKLRRSVTECKAYEADRSRPLDINIDLPDEQAGLETAKRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLMMLISWATRVADVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMQVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAVEGPKMWAAGWQTALSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIQPVNALGAAIAILGTFLYSQVCFHIS. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00205 398 PANTHER SOLUTE CARRIER FAMILY 35 103 393 - -
Seca12g00205 398 Pfam Triose-phosphate Transporter family 102 391 IPR004853 -
Seca12g00205 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 393 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca12g00205 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 144 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00205 Seca-Chr12 1921126 1923254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00205 45 393 Antiporters AT1G61800 83.954 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00205 K15283 K05350 gmx:100820126 663.685