Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00203 ATGGAGCTAATAGATCTTATTTTCCTATGTTTAGCCTTGCTGTTCGCGCGCTGGTGGTGGCGCTACTGGTCGACCACCGGCGGAGGGGCGAAGAACCTACCACCAGGGCCACCGGGGTGGCCAATCGTGGGTAACCTCTTCCAAGTGATCCTCCAACGCCGTCACTTCATCTATGTGGTCCGAGACTTACGTAAAAAGTACGGCCCAATCTTTACAATGCAAATGGGCCAGCGCACGTTGATCATCGTTACGAGCTCGGACCTGATCCACGAAGCCCTGATCCAGCGAGGCCCTATGTTCGCGAGCCGGCCCAAAGACTCACCGATCCGGCTCATATTCAGCATGGGGAAGTGTGCCATCAACTCCGCTGAATACGGCCCTCTCTGGCGCTCTCTCCGTCGCAACTTCGTCACGGAGATGATCTCCCCGCTCAGGGTTAAACAGTGTAGTTGGATAAGAAAATGGGCCATGGAAGCTCACATGAGAAGGATCCAACAAGAGGCCCGTGAAAACGGTTATGTCGAAATCATGAGCAATTGCAGGCTAACTATTTGCAGCATCCTCATCTGTCTTTGCTTCGGCGCTAAGATTACAGAAAACAGAATCAAAAGCATAGAGAGCATTTTGAAAGACGTGATGCTCATAACTCTTCCGAAGCTTCCAGACTTCTTGCCGGTGTTGACGCCGTTGTTCAGGCGTCAGGTAAAAGAAGCGAAGGAGCTGAGGAAGAAGCAGGTGGAGCTGTTGGCGCCGTTAATAAGGAGCAGGAAAGCTTACGTGGACAGCAACGGGACGTTGGACAATCCTGAGATGGTGAGTCCCGTTGGTGCTGCTTACGTGGACTCACTGTTTGGGTTGGAAGTTCCAGATCGAGGGAGGTTGGGAGAGGAGGAGCTTGTGACGCTGGTGTCGGAGGTGATCAGCGCAGGGACTGACACGAGCGCCACGGCAGTGGAGTGGGCCCTGCTTCACATGGTGATGGATCAGAACATTCAAGAGAGGTTATATAGGGAGATTGTGGGGTGTGTTGGGAAGAACGGTGTGGTCACTGAGAGTGACGTGGAAAAAATGCCTTATCTCGGGGCTATTGTGAAGGAGACTTTCCGGCGACATCCGCCGAGCCATTTCGTGCTTTCGCACGCTGCCACGGCGGAGACGGAGCTGGGTGGGTACACTATCCCAAAGGATGCGAGTGTTGAGTTTTACACTGCGTGGTTGTCAGAGGATCCGGATATGTGGGAGGATCCGAATGAGTTCCGACCCGAGAGGTTTTTGAATGGAGATGGGGTGGATGTGGATATCACTGGAACCAAAGGGGTTAAAATGATGCCGTTTGGTGTGGGAAGGAGGATTTGTCCAGCATGGACACTGGGGATCTTGCATATAAATATGTTGCTGGCTAAAATGGTGCTTGCTTTCAAGTGGCTGCCTATTCCCAATGCTCCACCCGACCCGACTGAGACTTTTGCTTTCACTATTGTTATGAAGAATCCTCTCAAGGCTGTTATGCTGCCTAGATCCATTTAG 1527 0.5219 MELIDLIFLCLALLFARWWWRYWSTTGGGAKNLPPGPPGWPIVGNLFQVILQRRHFIYVVRDLRKKYGPIFTMQMGQRTLIIVTSSDLIHEALIQRGPMFASRPKDSPIRLIFSMGKCAINSAEYGPLWRSLRRNFVTEMISPLRVKQCSWIRKWAMEAHMRRIQQEARENGYVEIMSNCRLTICSILICLCFGAKITENRIKSIESILKDVMLITLPKLPDFLPVLTPLFRRQVKEAKELRKKQVELLAPLIRSRKAYVDSNGTLDNPEMVSPVGAAYVDSLFGLEVPDRGRLGEEELVTLVSEVISAGTDTSATAVEWALLHMVMDQNIQERLYREIVGCVGKNGVVTESDVEKMPYLGAIVKETFRRHPPSHFVLSHAATAETELGGYTIPKDASVEFYTAWLSEDPDMWEDPNEFRPERFLNGDGVDVDITGTKGVKMMPFGVGRRICPAWTLGILHINMLLAKMVLAFKWLPIPNAPPDPTETFAFTIVMKNPLKAVMLPRSI. 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00203 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Seca12g00203 508 SUPERFAMILY Cytochrome P450 34 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 CDD CYP77_89 66 500 - -
Seca12g00203 508 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 9 498 - -
Seca12g00203 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca12g00203 508 FunFam Cytochrome P450 family protein 28 508 - -
Seca12g00203 508 Pfam Cytochrome P450 34 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00203 Seca-Chr12 1894008 1895624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00203 1 507 Cytochrome P450 AT1G11600 69.276 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00203 K21995 - gmx:100787281 911.368