Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca12g00186 | ATGGGCTGTCATGGTAGCAAGGAGAAAAAATCAAGGGCAGAGTATAGTGGGCATGGATCAGGCACAGGTGGTGGCGTTAATTACAATACTGTTCAACCATCTTCTGCTCAGGTTCAGACTTCAGCACCCAAGCCACAGCCACAGACACAGACACAGTCACAGGCTCCAATTGTCACCCCACAAAACCCAAAGCCTAGTGCCCAGAATGTGAAGGTAGACACAACCATATTGGGCAAACCATTTGAAGACATAAAAAAGTACTACACTTTGGGGAAAGAGTTGGGTAGAGGGCAATTTGGAATCACCTATCTGTGCACTGAGAATTCCACTGGCAACACTTATGCCTGCAAATCCATTTTGAAGAGAAAGCTTGTTTCCAAAGCTGATAAAGACGACATGAAGAGAGAGATTCAGATTATGCAGCATTTGTCTGGGCAACCCAACATTGTGGAATTTAAGGGTGCTTACGAGGACAGGTATTCGGTGCACCTTGTGATGGAACTCTGTGAAGGTGGTGAGCTTTTTGATCGAATCATTGCTCAGGGTCACTATTCTGAGAGAGCTGCTGCATCAATTTGCCGAGCCATTGTTAATGTTGTGCACATTTGCCATTTCATGGGTGTCTTGCATCGCGATCTAAAGCCTGAGAATTTCTTGCTTTCTAGCAAGGATGAAGGAGCAACGCTCAAGGCAACTGATTTTGGACTCTCTGTCTTCATTGAAGAAGGGAAGGTTTACCGTGATATGGTAGGCAGTGCCTACTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAGGAAATAGATATTTGGAGTGCAGGCATCATATTGTATATTCTCCTGAGTGGTGTACCACCTTTCTGGGCTGAAACTGAAAAAGGAATATTTAACGCCATATTGGAAGGTGAAATTGACTTTGTAAGTGAACCGTGGCCATCAATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGCTGAATCAGGATCCAAAGAAGCGGATTACTTCTGCTCAAGTCCTTGAACACCCATGGATGAGAGAAGGTGGAGAGGCATCTGATCAACCAATTGACAGTGCAGTTCTATCTAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAAAAACTTGCATTGAAGGTTATTGCTGAAAATCTATCAGAAGAGGAGATTAAAGGTCTCAAAACAATGTTTGCAAATATGGACACCGACAATAGTGGCACCATCACCTATGAAGAACTGAAGACAGGCTTGGCTCGAATTGGTTCGGGACTGTCTGAGGCTGAAGTGAAGCAACTCATGGAAGCTGCTGATGTTGATGGAAATGGATCAATTGACTATATTGAATTCATCTCAGCTACAATGCACAGGCACAGACTTGAACGGGATGAACATCTTTTCAAAGCATTCAAGTATTTTGATAAGGACAACAGTGGGTACATTACTAGAGATGAATTGGAGACTGCCATGACACAGCATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATTTCTGAGGTGGATACAGATAATGATGGGAGAATAAACTATGAGGAATTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACAGCTATTTTAG | 1611 | 0.4308 | MGCHGSKEKKSRAEYSGHGSGTGGGVNYNTVQPSSAQVQTSAPKPQPQTQTQSQAPIVTPQNPKPSAQNVKVDTTILGKPFEDIKKYYTLGKELGRGQFGITYLCTENSTGNTYACKSILKRKLVSKADKDDMKREIQIMQHLSGQPNIVEFKGAYEDRYSVHLVMELCEGGELFDRIIAQGHYSERAAASICRAIVNVVHICHFMGVLHRDLKPENFLLSSKDEGATLKATDFGLSVFIEEGKVYRDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGEIDFVSEPWPSISDSAKDLVRKMLNQDPKKRITSAQVLEHPWMREGGEASDQPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKTMFANMDTDNSGTITYEELKTGLARIGSGLSEAEVKQLMEAADVDGNGSIDYIEFISATMHRHRLERDEHLFKAFKYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGQLF. | 537 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca12g00186 | 536 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Seca12g00186 | 536 | ProSitePatterns | EF-hand calcium-binding domain. | 402 | 414 | IPR018247 | - | |
Seca12g00186 | 536 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 82 | 521 | - | - | |
Seca12g00186 | 536 | CDD | STKc_CAMK | 88 | 345 | - | - | |
Seca12g00186 | 536 | CDD | EFh | 465 | 526 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | Pfam | Protein kinase domain | 88 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g00186 | 536 | SMART | serkin_6 | 88 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g00186 | 536 | Gene3D | Transferase(Phosphotransferase) domain 1 | 174 | 353 | - | - | |
Seca12g00186 | 536 | MobiDBLite | consensus disorder prediction | 1 | 71 | - | - | |
Seca12g00186 | 536 | SUPERFAMILY | Protein kinase-like (PK-like) | 86 | 355 | IPR011009 | - | |
Seca12g00186 | 536 | SUPERFAMILY | EF-hand | 385 | 525 | IPR011992 | - | |
Seca12g00186 | 536 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 461 | 496 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | MobiDBLite | consensus disorder prediction | 22 | 71 | - | - | |
Seca12g00186 | 536 | FunFam | Calcium-dependent protein kinase 1 | 90 | 173 | - | - | |
Seca12g00186 | 536 | SMART | efh_1 | 429 | 457 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | SMART | efh_1 | 393 | 421 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | SMART | efh_1 | 500 | 528 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | SMART | efh_1 | 465 | 493 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | Gene3D | Phosphorylase Kinase; domain 1 | 90 | 173 | - | - | |
Seca12g00186 | 536 | ProSiteProfiles | Protein kinase domain profile. | 88 | 346 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca12g00186 | 536 | FunFam | calcium-dependent protein kinase 1 | 174 | 353 | - | - | |
Seca12g00186 | 536 | Pfam | EF-hand domain pair | 394 | 454 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | Pfam | EF-hand domain pair | 464 | 526 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | ProSitePatterns | Protein kinases ATP-binding region signature. | 94 | 121 | IPR017441 | GO:0005524 | |
Seca12g00186 | 536 | ProSitePatterns | EF-hand calcium-binding domain. | 474 | 486 | IPR018247 | - | |
Seca12g00186 | 536 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 497 | 531 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 389 | 424 | IPR002048 | GO:0005509 | |
Seca12g00186 | 536 | FunFam | Calcium-dependent protein kinase 1 | 354 | 529 | - | - | |
Seca12g00186 | 536 | ProSitePatterns | EF-hand calcium-binding domain. | 509 | 521 | IPR018247 | - | |
Seca12g00186 | 536 | ProSitePatterns | EF-hand calcium-binding domain. | 438 | 450 | IPR018247 | - | |
Seca12g00186 | 536 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 208 | 220 | IPR008271 | GO:0004672|GO:0006468 | |
Seca12g00186 | 536 | Gene3D | - | 354 | 528 | - | - | |
Seca12g00186 | 536 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 425 | 460 | IPR002048 | GO:0005509 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca12g00186 | Seca-Chr12 | 1741609 | 1747428 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca12g00186 | 1 | 536 | EF-hand Containing Proteins | AT4G04720 | 76.340 | 0.0 | 841 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Seca12g00186 | Pkinase | 2.1e-73 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca12g00186 | K13412 | - | gmx:100816859 | 925.62 |