Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca12g00184 ATGGCTCCGAAGGCTTTGATCTTTTTGGCTCTGTTAACCTTTTCAGCACTGTCTCTTACTCCTTCTTTTGCAGAGGATGCACAAGACACTGGCCTTGTTATGAACTTCTACAAGGAAACATGTCCTCAGGCTGAAGACATCATCAAAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCTTGGCTCAGGAACATTTTCCATGATTGTGCTGTTCAGAGATGTGATGCTTCATTGTTGCTGGACTCCACAAGAAGGACCTTGTCTGAGAAGGAAACTGACAGGAGTTTTGGGTTGAGGAATTTTAGGTACATCGAGACCATCAAAGAAGCTGTGGAGAGGGAGTGCCCTGGAGTTGTTTCTTGTGCTGATATCCTTGTTCTCTCTGCCAGAGATGGCATTGTTGCGCTTGCTTTGTTGCAGCTAGGAGGTCCCCATATCCCTCTTAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCAGAAGTGGTTGAGCAGTACCTCCCAGACCACAATGAATCCATTTCTGCTGTTCTTGAGAAGTTTGGTGCCATGGGAATTGACACCCCAGGAGTAGTTGCTTTGCTTGGAGCACACAGTGTTGGTCGAACCCACTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGGTTGACCCAGCACTGAATCCAGACCATATCCCCCACATGCTGAAGAAGTGCCCTGATGCCATTCCAGACCCAAAGGCGGTTCAGTATGTGAGAAACGACCGTGGCACACCCATGATTCTAGACAACAACTATTACAGAAATATATTGGACAACAAGGGTCTGTTGATAGTGGATCACCAATTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTTTCTAGAGCCATTACCTTGCTCTCTGAAAACAACCCTCTCACTGGCACTGAGGGTGAGATCAGAAAACAGTGCAATGTTGCCAACAAACACCATGAGGAGCCTTAA 1020 0.4676 MAPKALIFLALLTFSALSLTPSFAEDAQDTGLVMNFYKETCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQRCDASLLLDSTRRTLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVALALLQLGGPHIPLKTGRRDGRRSRAEVVEQYLPDHNESISAVLEKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHIPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLIVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTEGEIRKQCNVANKHHEEP. 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca12g00184 339 FunFam Peroxidase 173 312 - -
Seca12g00184 339 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 FunFam Peroxidase 35 183 - -
Seca12g00184 339 Pfam Peroxidase 49 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 SUPERFAMILY Heme-dependent peroxidases 32 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 Gene3D - 35 333 - -
Seca12g00184 339 ProSiteProfiles Plant heme peroxidase family profile. 31 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 PANTHER - 14 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca12g00184 339 Gene3D Peroxidase, domain 2 173 312 - -
Seca12g00184 339 CDD secretory_peroxidase 31 331 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca12g00184 Seca-Chr12 1729614 1732470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca12g00184 1 336 Peroxidase AT4G21960 78.274 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca12g00184 K00430 - gmx:547513 610.527